RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 CHST4Q8NCG5 386 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 ST6GALNAC3Q8NDV1 305 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 OR51G1Q8NGK1 321 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 COX14Q96I36 57 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 RTBDNQ9BSG5 229 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-201ENST00000328923 CTDSP1Q9GZU7 261 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 C6orf106Q9H6K1 298 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-201ENST00000328923 LYRM2Q9NU23 88 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-201ENST00000328923 NCOR1O75376 2440 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 C2orf16Q68DN1 1984 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 TRANK1O15050 2925 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 MAP1LC3B2A6NCE7 125 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 LDB3O75112 727 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 GALR1P47211 349 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 RBPJQ06330 500 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 GPM6BQ13491 265 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 SAMD13Q5VXD3 122 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 LINC00114Q6XXX2 140 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 CPT1CQ8TCG5 803 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 NMNAT3Q96T66 252 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 HSPB9Q9BQS6 159 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 MAP1LC3BQ9GZQ8 125 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 BET1LQ9NYM9 111 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 C19orf53Q9UNZ5 99 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-201ENST00000328923 A0A1W2PRS3 328 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 B4DGG1 531 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 GDF9O60383 454 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 NGFRP08138 427 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 IFI6P09912 130 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 MC5RP33032 325 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 CTRLP40313 264 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 TAS2R30P59541 319 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 POM121L1PQ3SYA9 428 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 KRTCAP3Q53RY4 240 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 OR4A47Q6IF82 309 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 CMTM2Q8TAZ6 248 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 ADIPOR1Q96A54 375 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 GPX7Q96SL4 187 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-201ENST00000328923 CALHM2Q9HA72 323 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 ZNF160Q9HCG1 818 aa10.36□□□□□ -0.75
SHMT2-201ENST00000328923 TMEM265A0A087WTH1 108 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 IGLC2P0DOY2 106 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 IGLC3P0DOY3 106 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 RPS20P60866 119 aaKnown RBP10.35□□□□□ -0.75
SHMT2-201ENST00000328923 PRDX4Q13162 271 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 SQSTM1Q13501 440 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 ADAMTSL4Q6UY14 1074 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 ADGRE4PQ86SQ3 457 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 CDRT4Q8N9R6 151 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 OR2I1PQ8NGU4 316 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 KTI12Q96EK9 354 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-201ENST00000328923 TRIOO75962 3097 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 C9orf172C9J069 976 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 G3V3Y1 287 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 PRNPP04156 253 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 ZNF43P17038 809 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 CTSSP25774 331 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 ADIRFQ15847 76 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 FHL5Q5TD97 284 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 CADM4Q8NFZ8 388 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 OR4B1Q8NGF8 309 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 OR52L2PQ8NGH6 319 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 PTX4Q96A99 478 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 ZNF48Q96MX3 618 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-201ENST00000328923 FBRSQ9HAH7 460 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 COL4A2P08572 1712 aa10.35□□□□□ -0.75
SHMT2-201ENST00000328923 NPIPA5A0A0B4J1W7 369 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 LOC102723971A0A1B0GUV8 181 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 DCDC2BA2VCK2 349 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 RNF212BA8MTL3 300 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 GNB3P16520 340 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 TCN2P20062 427 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 ATP6V0CP27449 155 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 UBE2NP61088 152 aaKnown RBP10.34□□□□□ -0.75
SHMT2-201ENST00000328923 SP5Q6BEB4 398 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-201ENST00000328923 NIT1Q86X76 327 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 RCBTB1Q8NDN9 531 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 OR11L1Q8NGX0 322 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 ZNF519Q8TB69 540 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 ARRDC3Q96B67 414 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 TMEM186Q96B77 213 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 SARAFQ96BY9 339 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 SCARF2Q96GP6 870 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-201ENST00000328923 IMMP2LQ96T52 175 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 MACROD1Q9BQ69 325 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 LPAR5Q9H1C0 372 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 MANBALQ9NQG1 85 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 ELOVL5Q9NYP7 299 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 GNG13Q9P2W3 67 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 RNF114Q9Y508 228 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 OTOL1A6NHN0 477 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-201ENST00000328923 ZNF891A8MT65 544 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-201ENST00000328923 ONECUT2O95948 504 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 STATHP02808 62 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 CT45A8P0DMV1 189 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 CT45A9P0DMV2 189 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 BLKP51451 505 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 RPS4XP62701 263 aaKnown RBP10.34□□□□□ -0.75
SHMT2-201ENST00000328923 TLE3Q04726 772 aa10.34□□□□□ -0.75
SHMT2-201ENST00000328923 DMWDQ09019 674 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms