RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 XKR7Q5GH72 579 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 LSRQ86X29 649 aaPredicted RBP7.06□□□□□ -1.28
CIITA-201ENST00000324288 VN1R2Q8NFZ6 395 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 HSD17B10Q99714 261 aaKnown RBP7.06□□□□□ -1.28
CIITA-201ENST00000324288 Q9N2K0 584 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 PRSS50Q9UI38 385 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 DAPP1Q9UN19 280 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 C19orf53Q9UNZ5 99 aaPredicted RBP7.06□□□□□ -1.28
CIITA-201ENST00000324288 FXYD1O00168 92 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 NKG7Q16617 165 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 FCRL6Q6DN72 434 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 DND1Q8IYX4 353 aaKnown RBP7.06□□□□□ -1.28
CIITA-201ENST00000324288 ATG101Q9BSB4 218 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 ERRFI1Q9UJM3 462 aaPredicted RBP7.06□□□□□ -1.28
CIITA-201ENST00000324288 ADAMTS5Q9UNA0 930 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 ELOA3CA0A087WX78 387 aaPredicted RBP7.06□□□□□ -1.28
CIITA-201ENST00000324288 TSPO2Q5TGU0 170 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 ZNF841Q6ZN19 808 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 ZNF788Q6ZQV5 615 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 C5orf17Q8NAS9 161 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 OR10G4Q8NGN3 311 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 OR10G9Q8NGN4 311 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 OR10G7Q8NGN6 311 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 PSG11Q9UQ72 335 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 C2CD3Q4AC94 2353 aa7.06□□□□□ -1.28
CIITA-201ENST00000324288 PYCR3Q53H96 274 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 FAHD2AQ96GK7 314 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 MAP1LC3CQ9BXW4 147 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 SLC7A10Q9NS82 523 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 TMEM218A2RU14 115 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 PPM1DO15297 605 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 ETHE1O95571 254 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 PGFP49763 221 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 FNDC7Q5VTL7 733 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 LAT2Q9GZY6 243 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 PCDH15Q96QU1 1955 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 TIAM2Q8IVF5 1701 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 C7orf77A4D0Y5 90 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 SPCS3P61009 180 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 RNF165Q6ZSG1 346 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 ZDHHC22Q8N966 263 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 TNRC6AQ8NDV7 1962 aaKnown RBP7.05□□□□□ -1.28
CIITA-201ENST00000324288 DNAJC25-GNG10A0A024R161 153 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 CLDN34H7C241 214 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 IGHA1P01876 353 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 IGHA2P01877 340 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 STAG3L2P0CL84 134 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 AREGP15514 252 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 HINT1P49773 126 aaPredicted RBP7.05□□□□□ -1.28
CIITA-201ENST00000324288 ZNF260Q3ZCT1 412 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 LGALSLQ3ZCW2 172 aaPredicted RBP7.05□□□□□ -1.28
CIITA-201ENST00000324288 SFT2D2O95562 160 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 LYG1Q8N1E2 194 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 TMEM191AQ9H0A3 160 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 M0R3E3 92 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 DSCR3O14972 297 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 TMEM52BQ4KMG9 183 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 WDR38Q5JTN6 314 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 DOCK2Q92608 1830 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 LOC107984156A0A0G2JMH3 177 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 KLK10O43240 276 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 CEACAM6P40199 344 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 ARL17AQ8IVW1 177 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 PHOSPHO2Q8TCD6 241 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 CCL17Q92583 94 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 WNT2BQ93097 391 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 SPACA9Q96E40 222 aaPredicted RBP7.05□□□□□ -1.28
CIITA-201ENST00000324288 KTI12Q96EK9 354 aaPredicted RBP7.05□□□□□ -1.28
CIITA-201ENST00000324288 MS4A3Q96HJ5 214 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 PRRT4C9JH25 899 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 SP1P08047 785 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 FGF20Q9NP95 211 aaPredicted RBP7.05□□□□□ -1.28
CIITA-201ENST00000324288 ARFGEF1Q9Y6D6 1849 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 SCGB1A1P11684 91 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 OSR2Q8N2R0 312 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 LILRB1Q8NHL6 650 aaPredicted RBP7.05□□□□□ -1.28
CIITA-201ENST00000324288 NAT8Q9UHE5 227 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 TOPAZ1Q8N9V7 1692 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 LINC01553A4QN01 128 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 ZNF253O75346 499 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 OR5AC1P0C628 307 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 FMODQ06828 376 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 EGR3Q06889 387 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 LIAT1Q6ZQX7 453 aa7.05□□□□□ -1.28
CIITA-201ENST00000324288 A0A1B0GTL3 188 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 NTN1O95631 604 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 CXCL3P19876 107 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 ELFN2Q5R3F8 820 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 DNLZQ5SXM8 178 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 LDLRAD1Q5T700 205 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 FAHD1Q6P587 224 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 DEFB123Q8N688 67 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 DDA1Q9BW61 102 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 MAST2Q6P0Q8 1798 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 TMEM189-UBE2V1I3L0A0 370 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 K7ERU9 68 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 TMEM127O75204 238 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 MGPP08493 103 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 NMUP48645 174 aa7.04□□□□□ -1.28
CIITA-201ENST00000324288 CEACAM16Q2WEN9 425 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms