RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CD22P20273 847 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 UBE2NP61088 152 aaKnown RBP6.29□□□□□ -1.4
SMC1A-201ENST00000322213 PMCHL1Q16048 86 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 BTNL3Q6UXE8 466 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 PIGTQ969N2 578 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 TGIF2-C20orf24A0A0A6YYL0 155 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 CDKN2AP42771 156 aaKnown RBP6.29□□□□□ -1.4
SMC1A-201ENST00000322213 PLP1P60201 277 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 ASTLQ6HA08 431 aaPredicted RBP6.29□□□□□ -1.4
SMC1A-201ENST00000322213 C19orf47Q8N9M1 422 aaKnown RBP6.29□□□□□ -1.4
SMC1A-201ENST00000322213 CPEB3Q8NE35 698 aaKnown RBP6.29□□□□□ -1.4
SMC1A-201ENST00000322213 SLC25A22Q9H936 323 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 CDH20Q9HBT6 801 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 SLC2A8Q9NY64 477 aa6.29□□□□□ -1.4
SMC1A-201ENST00000322213 C3orf85A0A1B0GTC6 90 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 POU3F2P20265 443 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-201ENST00000322213 BTF3P20290 206 aaKnown RBP6.28□□□□□ -1.4
SMC1A-201ENST00000322213 OTX2P32243 289 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 PLGLAQ15195 96 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 KLHDC7BQ96G42 594 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 WIPI2Q9Y4P8 454 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 COL5A1P20908 1838 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-201ENST00000322213 ISLRO14498 428 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 HS3ST1O14792 307 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 COX5BP10606 129 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 CLDN17P56750 224 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 NTHL1P78549 312 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 DEFB110Q30KQ9 67 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 CFAP161Q6P656 301 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 MYPOPQ86VE0 399 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-201ENST00000322213 CHST5Q9GZS9 411 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 HCRTR1O43613 425 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 P2RY2P41231 377 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 SLC38A11Q08AI6 406 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 EXT1Q16394 746 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 OR2A1Q8NGT9 310 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 LIPHQ8WWY8 451 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 WDR34Q96EX3 536 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 CALHM2Q9HA72 323 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 IL21Q9HBE4 155 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 ZNF391Q9UJN7 358 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 DAPP1Q9UN19 280 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 TRBV9A0A0B4J1U6 114 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 MED19A0JLT2 244 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-201ENST00000322213 CYR61O00622 381 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 MOSPD3O75425 235 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 NXPH2O95156 264 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 PEX11BO96011 259 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 MEF2BQ02080 365 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-201ENST00000322213 NHLH1Q02575 133 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 ST8SIA1Q92185 356 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 GNG12Q9UBI6 72 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 ZDHHC8Q9ULC8 765 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 INSL6Q9Y581 213 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 VSTM5A8MXK1 200 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 GLI4P10075 376 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 ABHD5Q8WTS1 349 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 BLNKQ8WV28 456 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 GALNT14Q96FL9 552 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 WSB2Q9NYS7 404 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-201ENST00000322213 HIVEP3Q5T1R4 2406 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 CTSDP07339 412 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-201ENST00000322213 TMEM215Q68D42 235 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 LIMS2Q7Z4I7 341 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 MAML2Q8IZL2 1156 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-201ENST00000322213 GVQW1Q8N7I0 195 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 ADAT3Q96EY9 351 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-201ENST00000322213 P2RX4Q99571 388 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 SLC52A3Q9NQ40 469 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 PMS2P1A4D2B8 440 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 GAGE10A6NGK3 116 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 PRAMEF25A6NGN4 478 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 C4orf47A7E2U8 309 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 M0R135 149 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 GYPAP02724 150 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 APCSP02743 223 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 SUB1P53999 127 aaKnown RBP eCLIP6.28□□□□□ -1.42e-9■■■■■ 50.3
SMC1A-201ENST00000322213 ISXQ2M1V0 245 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 C10orf111Q8N326 155 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 OR10G8Q8NGN5 311 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 SLC25A43Q8WUT9 341 aaPredicted RBP6.28□□□□□ -1.4
SMC1A-201ENST00000322213 ZNF799Q96GE5 643 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 TAAR6Q96RI8 345 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 TMEM191AQ9H0A3 160 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 SLC22A13Q9Y226 551 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 ADAMTS20P59510 1910 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 TLCD2A6NGC4 264 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 MPPED1O15442 326 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 OR8B8Q15620 311 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 OSR2Q8N2R0 312 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 CLDN23Q96B33 292 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 LPAR4Q99677 370 aa6.28□□□□□ -1.4
SMC1A-201ENST00000322213 NPIPB8E9PQR5 432 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 LINC01387J3KSC0 135 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 STAG3L3P0CL85 134 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 SELLP14151 372 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 KLF3P57682 345 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 PLPPR5Q32ZL2 321 aa6.27□□□□□ -1.41
SMC1A-201ENST00000322213 KTI12Q96EK9 354 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-201ENST00000322213 GDE1Q9NZC3 331 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms