RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 MTCP1P56278 107 aa8.41□□□□□ -1.06
PTPRA-202ENST00000318266 MYBPHQ13203 477 aa8.41□□□□□ -1.06
PTPRA-202ENST00000318266 SPIN3Q5JUX0 258 aa8.41□□□□□ -1.06
PTPRA-202ENST00000318266 UEVLDQ8IX04 471 aa8.41□□□□□ -1.06
PTPRA-202ENST00000318266 C1orf87Q8N0U7 546 aa8.41□□□□□ -1.06
PTPRA-202ENST00000318266 LGI3Q8N145 548 aa8.41□□□□□ -1.06
PTPRA-202ENST00000318266 KIAA1456Q9P272 454 aa8.41□□□□□ -1.06
PTPRA-202ENST00000318266 B3GAT1Q9P2W7 334 aa8.41□□□□□ -1.06
PTPRA-202ENST00000318266 TMED3Q9Y3Q3 217 aa8.41□□□□□ -1.06
PTPRA-202ENST00000318266 UNC13CQ8NB66 2214 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 VSTM2BA6NLU5 285 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 EREGO14944 169 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 IFNA10P01566 189 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 MMP7P09237 267 aaPredicted RBP8.4□□□□□ -1.06
PTPRA-202ENST00000318266 CD200P41217 278 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 DYNLT3P51808 116 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 HLA-DRB3P79483 266 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 ZNF266Q14584 549 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 IL13RA2Q14627 380 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 FAM189A2Q15884 450 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 SLC25A24Q6NUK1 477 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 TMEM92Q6UXU6 159 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 CMTM1Q8IZ96 169 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 ZNF664Q8N3J9 261 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 DEFB119Q8N690 84 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 OR2AE1Q8NHA4 323 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 WFIKKN1Q96NZ8 548 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 GLRX2Q9NS18 164 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 NECAP2Q9NVZ3 263 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 GAB2Q9UQC2 676 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 PCDH15Q96QU1 1955 aa8.4□□□□□ -1.06
PTPRA-202ENST00000318266 ELOA3CA0A087WX78 387 aaPredicted RBP8.4□□□□□ -1.07
PTPRA-202ENST00000318266 A0A1W2PQD3 144 aa8.4□□□□□ -1.07
PTPRA-202ENST00000318266 EPOPA6NHQ4 379 aa8.4□□□□□ -1.07
PTPRA-202ENST00000318266 SHISA7A6NL88 538 aa8.4□□□□□ -1.07
PTPRA-202ENST00000318266 FOXI3A8MTJ6 420 aaPredicted RBP8.4□□□□□ -1.07
PTPRA-202ENST00000318266 EFNA2O43921 213 aa8.4□□□□□ -1.07
PTPRA-202ENST00000318266 IGHG1P01857 330 aa8.4□□□□□ -1.07
PTPRA-202ENST00000318266 CD55P08174 381 aa8.4□□□□□ -1.07
PTPRA-202ENST00000318266 NR2C1P13056 603 aa8.4□□□□□ -1.07
PTPRA-202ENST00000318266 NKX2-1P43699 371 aaPredicted RBP8.4□□□□□ -1.07
PTPRA-202ENST00000318266 VAMP2P63027 116 aa8.4□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF154Q13106 437 aa8.4□□□□□ -1.07
PTPRA-202ENST00000318266 PIGYQ3MUY2 71 aa8.4□□□□□ -1.07
PTPRA-202ENST00000318266 LCN15Q6UWW0 184 aa8.4□□□□□ -1.07
PTPRA-202ENST00000318266 MSI2Q96DH6 328 aaKnown RBP8.4□□□□□ -1.07
PTPRA-202ENST00000318266 CABLES2Q9BTV7 478 aa8.4□□□□□ -1.07
PTPRA-202ENST00000318266 ATG2AQ2TAZ0 1938 aa8.4□□□□□ -1.07
PTPRA-202ENST00000318266 TCRBV21S2A2A0A5A6 115 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 BLACEA4D250 179 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 LIPT2A6NK58 231 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 IFNL4K9M1U5 179 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 GFRA3O60609 400 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 SPCS3P61009 180 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 M1APQ8TC57 530 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 NAT6Q93015 286 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 DDIT4LQ96D03 193 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 MOB1AQ9H8S9 216 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 CALHM2Q9HA72 323 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 GZMBP10144 247 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 PNLIPP16233 465 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 ALDH3B1P43353 468 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 CAPZBP47756 277 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 THEM4Q5T1C6 240 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 BEND4Q6ZU67 534 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 TMEM252Q8N6L7 170 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 NOXO1Q8NFA2 376 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 C18orf12Q96KH6 178 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF665Q9H7R5 613 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 PNRC2Q9NPJ4 139 aaKnown RBP8.39□□□□□ -1.07
PTPRA-202ENST00000318266 KLRF1Q9NZS2 232 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 LRFN1Q9P244 771 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 KLHL13Q9P2N7 655 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 OR14J1Q9UGF5 321 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 ZNF318Q5VUA4 2279 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 A0A087WWC5 75 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 C9J4A7 227 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 HSPA12AO43301 675 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 OR2J2O76002 312 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 PGA3P0DJD8 388 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 HERV-K104P61576 105 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 CLDND2Q8NHS1 167 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 GABRG3Q99928 467 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 GPR87Q9BY21 358 aa8.39□□□□□ -1.07
PTPRA-202ENST00000318266 MRPL13Q9BYD1 178 aaKnown RBP8.39□□□□□ -1.07
PTPRA-202ENST00000318266 UBE2J1Q9Y385 318 aaPredicted RBP8.39□□□□□ -1.07
PTPRA-202ENST00000318266 C2orf16Q68DN1 1984 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 RPL36A-HNRNPH2H7BZ11 118 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 ADAM20O43506 726 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 AADACP22760 399 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 MRPS34P82930 218 aaKnown RBP8.38□□□□□ -1.07
PTPRA-202ENST00000318266 ZP4Q12836 540 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 THNSL2Q86YJ6 484 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 OR1N1Q8NGS0 311 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 SSC4DQ8WTU2 575 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 FAM131CQ96AQ9 280 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 LRRC61Q9BV99 259 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 WNT16Q9UBV4 365 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 SDK2Q58EX2 2172 aa8.38□□□□□ -1.07
PTPRA-202ENST00000318266 IGKV3D-11A0A0A0MRZ8 115 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms