RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 NPIPA5A0A0B4J1W7 369 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 NPIPA7E9PJI5 369 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 TGFBR3LH3BV60 316 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 HRKO00198 91 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 TAAR5O14804 337 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 DOK2O60496 412 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 NPIPA8P0DM63 369 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 ARG2P78540 354 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 TLE1Q04724 770 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 TDRG1Q3Y452 100 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 HIKESHIQ53FT3 197 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 MYO7BQ6PIF6 2116 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 CLEC18BQ6UXF7 455 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 OR52N4Q8NGI2 321 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 SDSLQ96GA7 329 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 HES7Q9BYE0 225 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.2□□□□□ -1.1
CAPN3-201ENST00000318023 LSM5Q9Y4Y9 91 aaKnown RBP8.2□□□□□ -1.1
CAPN3-201ENST00000318023 IER3IP1Q9Y5U9 82 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 POLEQ07864 2286 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 LOC102724200A0A096LPH7 203 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-201ENST00000318023 IFNA6P05013 189 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 HIST1H1TP22492 207 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-201ENST00000318023 BSGP35613 385 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 ALDH3B1P43353 468 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 VAMP2P63027 116 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 SSBP1Q04837 148 aaKnown RBP8.2□□□□□ -1.1
CAPN3-201ENST00000318023 P4HA3Q7Z4N8 544 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 LYG1Q8N1E2 194 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 NUDT10Q8NFP7 164 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 TP53RKQ96S44 253 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 LPAR4Q99677 370 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 NIPSNAP3BQ9BS92 247 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 ICAM5Q9UMF0 924 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 TRBV11-1A0A0K0K1C0 115 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 FGF17O60258 216 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 CIDEAO60543 219 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 OR5AC1P0C628 307 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 COX6A1P12074 109 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 RPS2P15880 293 aaKnown RBP8.2□□□□□ -1.1
CAPN3-201ENST00000318023 ZNF708P17019 499 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 FRKP42685 505 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-201ENST00000318023 ASCL1P50553 236 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 ZNF136P52737 540 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 H3F3AP84243 136 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 PMP22Q01453 160 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 PRSS8Q16651 343 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 GLYATL3Q5SZD4 288 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 SLC35D2Q76EJ3 337 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 FAM220AQ7Z4H9 259 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 MDGA2Q7Z553 956 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 CPEB2Q7Z5Q1 589 aaKnown RBP8.2□□□□□ -1.1
CAPN3-201ENST00000318023 ARHGEF39Q8N4T4 335 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 TMEM156Q8N614 296 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 ZDHHC22Q8N966 263 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 CHST4Q8NCG5 386 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 RNF128Q8TEB7 428 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 CYYR1Q96J86 154 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 ABHD14AQ9BUJ0 271 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 CHRNA10Q9GZZ6 450 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 ZNF552Q9H707 407 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-201ENST00000318023 MSL2Q9HCI7 577 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 RNF150Q9ULK6 438 aa8.2□□□□□ -1.1
CAPN3-201ENST00000318023 ZNF443Q9Y2A4 671 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-201ENST00000318023 A0A087WWC5 75 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 FTCDNL1E5RQL4 147 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 CLEC3AO75596 197 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 PET100P0DJ07 73 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 LYL1P12980 280 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 UCP2P55851 309 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 RND3P61587 244 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 FAM3AP98173 230 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 AKAP6Q13023 2319 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 OR1Q1Q15612 314 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 ABLIM2Q6H8Q1 611 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 SPINK14Q6IE38 97 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 ANKRD37Q7Z713 158 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 COX18Q8N8Q8 333 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 NECAP1Q8NC96 275 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 ALKBH7Q9BT30 221 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-201ENST00000318023 SLC26A1Q9H2B4 701 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 ADAP2Q9NPF8 381 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 FKBP11Q9NYL4 201 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 MRM2Q9UI43 246 aaKnown RBP8.19□□□□□ -1.1
CAPN3-201ENST00000318023 DAPP1Q9UN19 280 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 ICE1Q9Y2F5 2266 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 SSUH2Q9Y2M2 353 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 USP9YO00507 2555 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-201ENST00000318023 RBFOX3A6NFN3 312 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 VSTM2BA6NLU5 285 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 TMEM238C9JI98 176 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 H0YIG0 161 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 APOBEC1P41238 236 aaKnown RBP8.19□□□□□ -1.1
CAPN3-201ENST00000318023 DIO1P49895 249 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 RRADP55042 308 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 Q5PR19 223 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 DGAT2L6Q6ZPD8 337 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 NUFIP2Q7Z417 695 aaKnown RBP8.19□□□□□ -1.1
CAPN3-201ENST00000318023 ADPRHL1Q8NDY3 354 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 OR51A2Q8NGJ7 313 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms