RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 FFAR4Q5NUL3 377 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 CLEC9AQ6UXN8 241 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 TRAF4Q9BUZ4 470 aaPredicted RBP12.13□□□□□ -0.47
SPAST-201ENST00000315285 ZDHHC11Q9H8X9 412 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 SLC35D1Q9NTN3 355 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 DNAJC13O75165 2243 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 AHCTF1Q8WYP5 2266 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 DEFB108AA8MXU0 73 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 MKRN2OSH3BPM6 223 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 CLDN34H7C241 214 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 IL9P15248 144 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 SNRPEP62304 92 aaKnown RBP12.12□□□□□ -0.47
SPAST-201ENST00000315285 TBC1D26Q86UD7 250 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 CT55Q8WUE5 264 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 MRPL24Q96A35 216 aaKnown RBP12.12□□□□□ -0.47
SPAST-201ENST00000315285 POM121L2Q96KW2 1035 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 CTDSP1Q9GZU7 261 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 KLK13Q9UKR3 277 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 VSIG4Q9Y279 399 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 MYOFQ9NZM1 2061 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 TRBV5-5A0A0J9YX44 114 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 FCGR3BO75015 233 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 CT45A10P0DMU9 189 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 VSIG10L2P0DP72 767 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 P2RY1P47900 373 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 FOXL2P58012 376 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 SSTP61278 116 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 PPP1CBP62140 327 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 IGFBP7Q16270 282 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 NUFIP2Q7Z417 695 aaKnown RBP12.12□□□□□ -0.47
SPAST-201ENST00000315285 MAFAQ8NHW3 353 aaPredicted RBP12.12□□□□□ -0.47
SPAST-201ENST00000315285 ALPK2Q86TB3 2170 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 LYZL6O75951 148 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 C19orf57Q0VDD7 668 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 Q3ZCU0 254 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.12□□□□□ -0.47
SPAST-201ENST00000315285 OR2D2Q9H210 308 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 SMOC1Q9H4F8 434 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 SLC2A9Q9NRM0 540 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 ZNF205O95201 554 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 AMELYQ99218 206 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 LPAR3Q9UBY5 353 aa12.12□□□□□ -0.47
SPAST-201ENST00000315285 PPYP01298 95 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 FSTP19883 344 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 RPS4Y1P22090 263 aaKnown RBP12.11□□□□□ -0.47
SPAST-201ENST00000315285 ZXDAP98168 799 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 ZP4Q12836 540 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 IL24Q13007 206 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 COL19A1Q14993 1142 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 TMEM104Q8NE00 496 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 IER2Q9BTL4 223 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 ZNF586Q9NXT0 402 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 VDAC1P21796 283 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 OR3A1P47881 315 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 CLPPQ16740 277 aaPredicted RBP12.11□□□□□ -0.47
SPAST-201ENST00000315285 ZNF251Q9BRH9 671 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 OR2H1Q9GZK4 316 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 FZR1Q9UM11 496 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 TRDCB7Z8K6 153 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 IFI6P09912 130 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 TMEM11P17152 192 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 ZNF345Q14585 488 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 ZNF501Q96CX3 271 aaPredicted RBP12.11□□□□□ -0.47
SPAST-201ENST00000315285 YIF1AO95070 293 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 SMIM10L1P0DMW3 83 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 LIFP15018 202 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 CSN1S1P47710 185 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 PLPPR5Q32ZL2 321 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 C1orf210Q8IVY1 113 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 TUSC5Q8IXB3 177 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 SIGLECL1Q8N7X8 197 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 SLC25A38Q96DW6 304 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 SMIM10Q96HG1 83 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 KIAA1456Q9P272 454 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 TNFSF18Q9UNG2 199 aa12.11□□□□□ -0.47
SPAST-201ENST00000315285 COX7A2P2O60397 106 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 TSPAN2O60636 221 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 TNFRSF1AP19438 455 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 CD200P41217 278 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 ZNF83P51522 516 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 CRYBA2P53672 197 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 DCAF12L2Q5VW00 463 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 ACY3Q96HD9 319 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 TMEM38BQ9NVV0 291 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 UPK3AO75631 287 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 CXCL2P19875 107 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 FCARP24071 287 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 HOGA1Q86XE5 327 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 CHEK1O14757 476 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 LY86O95711 162 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 SPINK2P20155 84 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 IL11P20809 199 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 ROM1Q03395 351 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 TMEM241Q24JQ0 296 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 PLAC9Q5JTB6 97 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 ABHD3Q8WU67 409 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 ZNF385AQ96PM9 386 aaKnown RBP12.1□□□□□ -0.47
SPAST-201ENST00000315285 FAM103A1Q9BTL3 118 aaKnown RBP12.1□□□□□ -0.47
SPAST-201ENST00000315285 HRASP01112 189 aa12.1□□□□□ -0.47
SPAST-201ENST00000315285 CTRB1P17538 263 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms