RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 FABP5Q01469 135 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 MED21Q13503 144 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 RNLSQ5VYX0 342 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 CD276Q5ZPR3 534 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 PRSS48Q7RTY5 328 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 CEACAM19Q7Z692 300 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 ZNF561Q8N587 486 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.87□□□□□ -0.83
SCFD1-201ENST00000311943 RBMXL1Q96E39 390 aaKnown RBP9.87□□□□□ -0.83
SCFD1-201ENST00000311943 MGLLQ99685 303 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 BANF2Q9H503 90 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 TMEM138Q9NPI0 162 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 TENM1Q9UKZ4 2725 aa9.87□□□□□ -0.83
SCFD1-201ENST00000311943 DSCAML1Q8TD84 2053 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 A0A0G2JK05 382 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 SMIM30A4D0T7 59 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 SC5DO75845 299 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 CD2P06729 351 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 ZNF44P15621 663 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 OMGP23515 440 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 PTGFRP43088 359 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 GLIPR1P48060 266 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 HSPA13P48723 471 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 RPL31P62899 125 aaKnown RBP9.86□□□□□ -0.83
SCFD1-201ENST00000311943 ACSM1Q08AH1 577 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 ATXN7L3Q14CW9 347 aaPredicted RBP9.86□□□□□ -0.83
SCFD1-201ENST00000311943 ZNF146Q15072 292 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 LDLRAD2Q5SZI1 272 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 UNQ9370/PRO34162Q6UXP9 181 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 SPARTQ8N0X7 666 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 JAGN1Q8N5M9 183 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 PNLDC1Q8NA58 520 aaKnown RBP9.86□□□□□ -0.83
SCFD1-201ENST00000311943 TMEM104Q8NE00 496 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 MS4A7Q9GZW8 240 aaPredicted RBP9.86□□□□□ -0.83
SCFD1-201ENST00000311943 DNTTIP1Q9H147 329 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 ZNRD1Q9P1U0 126 aa9.86□□□□□ -0.83
SCFD1-201ENST00000311943 RNF212BA8MTL3 300 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 LIPFP07098 398 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 GDNFP39905 211 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 GRK1Q15835 563 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 SLC22A6Q4U2R8 563 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 RBM48Q5RL73 367 aaKnown RBP9.85□□□□□ -0.83
SCFD1-201ENST00000311943 LRRTM1Q86UE6 522 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 C8orf46Q8TAG6 207 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 UBALD1Q8TB05 177 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 ITFG2Q969R8 447 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 FAM46BQ96A09 425 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 COQ2Q96H96 371 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 TRAV24A0A0B4J272 114 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 SLC33A1O00400 549 aaPredicted RBP9.85□□□□□ -0.83
SCFD1-201ENST00000311943 GEMIN2O14893 280 aaKnown RBP9.85□□□□□ -0.83
SCFD1-201ENST00000311943 TCF21O43680 179 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 ALX3O95076 343 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 IFNA2P01563 188 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 IGHV3-7P01780 117 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 COX7A1P24310 79 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 BMXP51813 675 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 DLX6P56179 175 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 TAS2R43P59537 309 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 PPP3R1P63098 170 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 PLA2G7Q13093 441 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 TUSC1Q2TAM9 212 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 OR8H2Q8N162 312 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 PLPPR1Q8TBJ4 325 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 DYRK2Q92630 601 aa9.85□□□□□ -0.83
SCFD1-201ENST00000311943 MYCBPQ99417 103 aaPredicted RBP9.85□□□□□ -0.83
SCFD1-201ENST00000311943 CYB5AP00167 134 aa9.84□□□□□ -0.83
SCFD1-201ENST00000311943 CHRM2P08172 466 aa9.84□□□□□ -0.83
SCFD1-201ENST00000311943 CLDN12P56749 244 aa9.84□□□□□ -0.83
SCFD1-201ENST00000311943 TPBGQ13641 420 aa9.84□□□□□ -0.83
SCFD1-201ENST00000311943 TAF9Q16594 264 aa9.84□□□□□ -0.83
SCFD1-201ENST00000311943 GLIPR1L1Q6UWM5 242 aa9.84□□□□□ -0.83
SCFD1-201ENST00000311943 UFD1Q92890 307 aa9.84□□□□□ -0.83
SCFD1-201ENST00000311943 AJUBAQ96IF1 538 aa9.84□□□□□ -0.83
SCFD1-201ENST00000311943 C19orf24Q9BVV8 132 aa9.84□□□□□ -0.83
SCFD1-201ENST00000311943 RNF167Q9H6Y7 350 aa9.84□□□□□ -0.83
SCFD1-201ENST00000311943 AK6Q9Y3D8 172 aaKnown RBP9.84□□□□□ -0.83
SCFD1-201ENST00000311943 STAB1Q9NY15 2570 aa9.84□□□□□ -0.83
SCFD1-201ENST00000311943 IGHV1-69DA0A0B4J2H0 117 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 DNAJC9-AS1A6NH13 148 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 MAGEB3O15480 346 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 HOXA3O43365 443 aaPredicted RBP9.83□□□□□ -0.84
SCFD1-201ENST00000311943 ECDO95905 644 aaPredicted RBP9.83□□□□□ -0.84
SCFD1-201ENST00000311943 IGHV1-69P01742 117 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 CPEP16870 476 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 FSTP19883 344 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 HILS1P60008 231 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 BDH1Q02338 343 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 RSU1Q15404 277 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 KRTAP21-3Q3LHN1 58 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 GPR157Q5UAW9 335 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 ASCL4Q6XD76 172 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 GDPD3Q7L5L3 318 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 LHFPL4Q7Z7J7 247 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 DYNAPQ8N1N2 210 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 HAVCR2Q8TDQ0 301 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 SNX22Q96L94 193 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 EXOSC4Q9NPD3 245 aaKnown RBP9.83□□□□□ -0.84
SCFD1-201ENST00000311943 DEGS1O15121 323 aa9.83□□□□□ -0.84
SCFD1-201ENST00000311943 GPX5O75715 221 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms