RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ANKRD11Q6UB99 2663 aaPredicted RBP18.11■□□□□ 0.49
ATG4D-201ENST00000309469 UCNP55089 124 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 ZNF660Q6AZW8 331 aaPredicted RBP18.11■□□□□ 0.49
ATG4D-201ENST00000309469 GFRALQ6UXV0 394 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 Q6ZPA2 131 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 C1orf174Q8IYL3 243 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 OR8H1Q8NGG4 311 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 CASTOR1Q8WTX7 329 aa18.11■□□□□ 0.49
ATG4D-201ENST00000309469 PLSCR5A0PG75 271 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 H0YL77 283 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 FAM87AP0C7U9 286 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 PI3P19957 117 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 KITLGP21583 273 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 GLRA1P23415 457 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 ECI1P42126 302 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 IL13RA2Q14627 380 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 ZNF718Q3SXZ3 478 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 SLC22A25Q6T423 547 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 DHRS11Q6UWP2 260 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 OR5M8Q8NGP6 311 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 SNRNP40Q96DI7 357 aaKnown RBP18.1■□□□□ 0.49
ATG4D-201ENST00000309469 SPACA1Q9HBV2 294 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 RAXQ9Y2V3 346 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 BOD1L1Q8NFC6 3051 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 A8MXE2 369 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 MCRIP1C9JLW8 97 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 SNAPC5O75971 98 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 PPP3CBP16298 524 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 HLA-GP17693 338 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 FABP6P51161 128 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 ZNF83P51522 516 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 NAAAQ02083 359 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 LIN54Q6MZP7 749 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 LPCAT3Q6P1A2 487 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 HEXA-AS1Q9H8Q6 139 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 CHMP1AQ9HD42 196 aaPredicted RBP18.1■□□□□ 0.49
ATG4D-201ENST00000309469 TINAGQ9UJW2 476 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 POLDIP2Q9Y2S7 368 aa18.1■□□□□ 0.49
ATG4D-201ENST00000309469 TMEM210A6NLX4 147 aa18.09■□□□□ 0.49
ATG4D-201ENST00000309469 PGAM2P15259 253 aa18.09■□□□□ 0.49
ATG4D-201ENST00000309469 GCH1P30793 250 aa18.09■□□□□ 0.49
ATG4D-201ENST00000309469 HTR2BP41595 481 aa18.09■□□□□ 0.49
ATG4D-201ENST00000309469 ZNF154Q13106 437 aa18.09■□□□□ 0.49
ATG4D-201ENST00000309469 MBNL2Q5VZF2 373 aaKnown RBP18.09■□□□□ 0.49
ATG4D-201ENST00000309469 TEX261Q6UWH6 196 aa18.09■□□□□ 0.49
ATG4D-201ENST00000309469 MUCL1Q96DR8 90 aa18.09■□□□□ 0.49
ATG4D-201ENST00000309469 LIME1Q9H400 295 aa18.09■□□□□ 0.49
ATG4D-201ENST00000309469 DECR2Q9NUI1 292 aa18.09■□□□□ 0.49
ATG4D-201ENST00000309469 FZR1Q9UM11 496 aa18.09■□□□□ 0.49
ATG4D-201ENST00000309469 U3KQ87 197 aa18.09■□□□□ 0.49
ATG4D-201ENST00000309469 TIMM8AO60220 97 aaPredicted RBP18.08■□□□□ 0.49
ATG4D-201ENST00000309469 BMP5P22003 454 aa18.08■□□□□ 0.49
ATG4D-201ENST00000309469 NFYAP23511 347 aaPredicted RBP18.08■□□□□ 0.49
ATG4D-201ENST00000309469 ALKBH2Q6NS38 261 aa18.08■□□□□ 0.49
ATG4D-201ENST00000309469 Q8IYB0 196 aa18.08■□□□□ 0.49
ATG4D-201ENST00000309469 ELMOD3Q96FG2 381 aa18.08■□□□□ 0.49
ATG4D-201ENST00000309469 WDR13Q9H1Z4 485 aa18.08■□□□□ 0.49
ATG4D-201ENST00000309469 ZNF835Q9Y2P0 537 aa18.08■□□□□ 0.49
ATG4D-201ENST00000309469 INTS1Q8N201 2190 aaKnown RBP18.08■□□□□ 0.48
ATG4D-201ENST00000309469 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.08■□□□□ 0.48
ATG4D-201ENST00000309469 C3orf80F5H4A9 247 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 M0R1B8 84 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 CDIPTO14735 213 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 MLNRO43193 412 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 SFT2D2O95562 160 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 NAPSAO96009 420 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 GRPP07492 148 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 C4BPBP20851 252 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 ERVK11-1P61568 191 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 SRSF4Q08170 494 aaKnown RBP18.08■□□□□ 0.48
ATG4D-201ENST00000309469 SRSF7Q16629 238 aaKnown RBP eCLIP18.08■□□□□ 0.48
ATG4D-201ENST00000309469 C3orf36Q3SXR2 165 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 Q6ZS49 121 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 KCTD9Q7L273 389 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 SUMF2Q8NBJ7 301 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 CLEC4MQ9H2X3 399 aaPredicted RBP18.08■□□□□ 0.48
ATG4D-201ENST00000309469 PIGMQ9H3S5 423 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 ASF1BQ9NVP2 202 aa18.08■□□□□ 0.48
ATG4D-201ENST00000309469 C14orf166Q9Y224 244 aaKnown RBP18.08■□□□□ 0.48
ATG4D-201ENST00000309469 A0A0G2JNJ9 132 aa18.07■□□□□ 0.48
ATG4D-201ENST00000309469 HSPB6O14558 160 aa18.07■□□□□ 0.48
ATG4D-201ENST00000309469 SUPT4H1P63272 117 aaKnown RBP18.07■□□□□ 0.48
ATG4D-201ENST00000309469 PRR30Q53SZ7 412 aaPredicted RBP18.07■□□□□ 0.48
ATG4D-201ENST00000309469 CLEC18BQ6UXF7 455 aa18.07■□□□□ 0.48
ATG4D-201ENST00000309469 NEK7Q8TDX7 302 aa18.07■□□□□ 0.48
ATG4D-201ENST00000309469 DHRS9Q9BPW9 319 aa18.07■□□□□ 0.48
ATG4D-201ENST00000309469 IFT22Q9H7X7 185 aa18.07■□□□□ 0.48
ATG4D-201ENST00000309469 Q9UFV3 132 aa18.07■□□□□ 0.48
ATG4D-201ENST00000309469 DMXL2Q8TDJ6 3036 aa18.07■□□□□ 0.48
ATG4D-201ENST00000309469 SVILO95425 2214 aa18.07■□□□□ 0.48
ATG4D-201ENST00000309469 CEP295Q9C0D2 2601 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 TRAV24A0A0B4J272 114 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 DBX1A6NMT0 343 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 HMSDA8MTL9 139 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 EEF1E1-BLOC1S5C9J1V9 151 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 L7N2F9 121 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 CCSO14618 274 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 GLAP06280 429 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 PGA5P0DJD9 388 aa18.06■□□□□ 0.48
ATG4D-201ENST00000309469 CXCL2P19875 107 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms