RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 FAM162BQ5T6X4 162 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 OR2M7Q8NG81 312 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 ABHD3Q8WU67 409 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 MIXL1Q9H2W2 232 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 NIT2Q9NQR4 276 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 HMSDA8MTL9 139 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 SOCS1O15524 211 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 PJVKQ0ZLH3 352 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 ETFRF1Q6IPR1 90 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 TMEM38BQ9NVV0 291 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 MYO16Q9Y6X6 1858 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 TRDCB7Z8K6 153 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 IGKV1D-16P01601 117 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 ZP3P21754 424 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 PLAC9Q5JTB6 97 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 ZNF561Q8N587 486 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 SLC26A10Q8NG04 563 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 GPR137Q96N19 417 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 NARFLQ9H6Q4 476 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 PILRAQ9UKJ1 303 aa14.04□□□□□ -0.16
USP42-201ENST00000306177 FAM24AA6NFZ4 105 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 B4E171 279 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 C1QCP02747 245 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 OPRK1P41145 380 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 TSPAN7P41732 249 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 ZNF429Q86V71 674 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 ZNF107Q9UII5 783 aaPredicted RBP14.03□□□□□ -0.16
USP42-201ENST00000306177 ZNF320A2RRD8 509 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 TXNDC12O95881 172 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 NGFRP08138 427 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 MMP16P51512 607 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 PHYHIPLQ96FC7 376 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 FAM186AA6NE01 2351 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 NTF3P20783 257 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 PRRX1P54821 245 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 OR5I1Q13606 314 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 DGAT2L6Q6ZPD8 337 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 GPR27Q9NS67 375 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 DBX1A6NMT0 343 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 PRSS44E7EML9 344 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 INHBBP09529 407 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 AHCTF1Q8WYP5 2266 aa14.03□□□□□ -0.16
USP42-201ENST00000306177 GEMIN2O14893 280 aaKnown RBP14.02□□□□□ -0.16
USP42-201ENST00000306177 MRPL22Q9NWU5 206 aaKnown RBP14.02□□□□□ -0.16
USP42-201ENST00000306177 GAR1Q9NY12 217 aaKnown RBP14.02□□□□□ -0.16
USP42-201ENST00000306177 IL36GQ9NZH8 169 aa14.02□□□□□ -0.16
USP42-201ENST00000306177 RBP4P02753 201 aa14.02□□□□□ -0.16
USP42-201ENST00000306177 CD3EP07766 207 aa14.02□□□□□ -0.16
USP42-201ENST00000306177 CLCF1Q9UBD9 225 aa14.02□□□□□ -0.16
USP42-201ENST00000306177 AMMECR1Q9Y4X0 333 aaPredicted RBP14.02□□□□□ -0.16
USP42-201ENST00000306177 TRAV38-1A0A0B4J264 116 aa14.02□□□□□ -0.17
USP42-201ENST00000306177 SCO1O75880 301 aa14.02□□□□□ -0.17
USP42-201ENST00000306177 GGTLC2Q14390 218 aa14.02□□□□□ -0.17
USP42-201ENST00000306177 ZNF528Q3MIS6 628 aa14.02□□□□□ -0.17
USP42-201ENST00000306177 SIGLECL1Q8N7X8 197 aa14.02□□□□□ -0.17
USP42-201ENST00000306177 ADTRPQ96IZ2 230 aa14.02□□□□□ -0.17
USP42-201ENST00000306177 RAB1BQ9H0U4 201 aa14.02□□□□□ -0.17
USP42-201ENST00000306177 TRAV8-7A0A075B6U6 113 aa14.02□□□□□ -0.17
USP42-201ENST00000306177 ZXDAP98168 799 aa14.02□□□□□ -0.17
USP42-201ENST00000306177 CLEC12BQ2HXU8 276 aa14.02□□□□□ -0.17
USP42-201ENST00000306177 C4orf17Q53FE4 359 aa14.02□□□□□ -0.17
USP42-201ENST00000306177 ETV3LQ6ZN32 361 aa14.02□□□□□ -0.17
USP42-201ENST00000306177 TMEM91Q6ZNR0 172 aa14.02□□□□□ -0.17
USP42-201ENST00000306177 ZNF586Q9NXT0 402 aa14.02□□□□□ -0.17
USP42-201ENST00000306177 BCL3P20749 454 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 PAX6P26367 422 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 ARID1AO14497 2285 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 OOEPA6NGQ2 149 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 ERVFC1-1P60608 527 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 MISP3Q96FF7 219 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 PRSS27Q9BQR3 290 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 ZDHHC11Q9H8X9 412 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 FBXL17Q9UF56 701 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 A0A1W2PN81 502 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 S100A8P05109 93 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 CHRNA7P36544 502 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 ZP4Q12836 540 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 PLPPR5Q32ZL2 321 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 Q56UQ5 140 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 CLEC18BQ6UXF7 455 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 TBC1D26Q86UD7 250 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 RAB33BQ9H082 229 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 WSB1Q9Y6I7 421 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 TPRP12270 2363 aaKnown RBP14.01□□□□□ -0.17
USP42-201ENST00000306177 HAND1O96004 215 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 FOXL2P58012 376 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 ATP6V1FQ16864 119 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 CHST5Q9GZS9 411 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 AAMDCQ9H7C9 122 aa14.01□□□□□ -0.17
USP42-201ENST00000306177 SPAARA0A1B0GVQ0 90 aa14□□□□□ -0.17
USP42-201ENST00000306177 MAP1LC3B2A6NCE7 125 aa14□□□□□ -0.17
USP42-201ENST00000306177 CDIPTO14735 213 aa14□□□□□ -0.17
USP42-201ENST00000306177 ADAP1O75689 374 aa14□□□□□ -0.17
USP42-201ENST00000306177 MNX1P50219 401 aaPredicted RBP14□□□□□ -0.17
USP42-201ENST00000306177 LIAT1Q6ZQX7 453 aa14□□□□□ -0.17
USP42-201ENST00000306177 OR4S2Q8NH73 311 aa14□□□□□ -0.17
USP42-201ENST00000306177 RAB1CQ92928 201 aa14□□□□□ -0.17
USP42-201ENST00000306177 MAP1LC3BQ9GZQ8 125 aa14□□□□□ -0.17
USP42-201ENST00000306177 NTMQ9P121 344 aa14□□□□□ -0.17
USP42-201ENST00000306177 J3QT63 122 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 279.5 ms