RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CGB2Q6NT52 195 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 ORAI1Q96D31 301 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 AURKAIP1Q9NWT8 199 aaPredicted RBP11.99□□□□□ -0.49
TRIM56-201ENST00000306085 ZNF142P52746 1687 aaPredicted RBP11.99□□□□□ -0.49
TRIM56-201ENST00000306085 SLCO4C1Q6ZQN7 724 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 LYRM4Q9HD34 91 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 RECKO95980 971 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 YPEL5P62699 121 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 ANGPTL4Q9BY76 406 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 RGPD2P0DJD1 1756 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 DSCR3O14972 297 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 OR5AC1P0C628 307 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 ZNF83P51522 516 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 SNURFLB1AK76 121 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 HMGN4O00479 90 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 ZNF252P-AS1Q0IIN9 211 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 ZNF766Q5HY98 468 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 ADAMTS17Q8TE56 1095 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 NTNG2Q96CW9 530 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 OR2W1Q9Y3N9 320 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 ARIH2OSQ8N7S6 290 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 PPIL1Q9Y3C6 166 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 HAND1O96004 215 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 C16orf70Q9BSU1 422 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 ERRFI1Q9UJM3 462 aaPredicted RBP11.99□□□□□ -0.49
TRIM56-201ENST00000306085 DNAJC25-GNG10A0A024R161 153 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 TMEM210A6NLX4 147 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 IL24Q13007 206 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 FAM27D1Q5T7N8 215 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 MRM1Q6IN84 353 aaKnown RBP11.99□□□□□ -0.49
TRIM56-201ENST00000306085 C3P01024 1663 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 C3orf85A0A1B0GTC6 90 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 GNG7O60262 68 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 OR8I2Q8N0Y5 310 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 OR13C6PQ8NH95 151 aa11.99□□□□□ -0.49
TRIM56-201ENST00000306085 POLR2AP24928 1970 aaKnown RBP11.98□□□□□ -0.49
TRIM56-201ENST00000306085 TIMP1P01033 207 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 MPV17LQ2QL34 196 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 ZNF324BQ6AW86 544 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-201ENST00000306085 Q8IYB0 196 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 LMO3Q8TAP4 145 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 ARHGAP5-AS1Q96IT6 56 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 TMUB1Q9BVT8 246 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 CMC2Q9NRP2 79 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 ROS1P08922 2347 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 CLDN15P56746 228 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 JOSD1Q15040 202 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-201ENST00000306085 TEX30Q5JUR7 227 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 OR4P4Q8NGL7 312 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 RBFOX2O43251 390 aaKnown RBP eCLIP11.98□□□□□ -0.497e-12■■□□□ 12.4
TRIM56-201ENST00000306085 ZNF26P17031 533 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-201ENST00000306085 RPS4Y2Q8TD47 263 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 ASCL3Q9NQ33 180 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 TBL2Q9Y4P3 447 aaKnown RBP11.98□□□□□ -0.49
TRIM56-201ENST00000306085 TDRD15B5MCY1 1934 aaKnown RBP11.98□□□□□ -0.49
TRIM56-201ENST00000306085 FAM53AQ6NSI3 398 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-201ENST00000306085 ACSM5Q6NUN0 579 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 SLC39A5Q6ZMH5 540 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 CBLN2Q8IUK8 224 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 FUT3P21217 361 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 MMP15P51511 669 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 OR4C3Q8NH37 302 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 RFESDQ8TAC1 157 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 TMEM167BQ9NRX6 74 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 ANKRD36A6QL64 1941 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 F2RL2O00254 374 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 APOBEC3DQ96AK3 386 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-201ENST00000306085 TEX37Q96LM6 180 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 PHLPP1O60346 1717 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 FAM157CP0CG43 387 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 GPR3P46089 330 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 PNRC1Q12796 327 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-201ENST00000306085 SMIM4Q8WVI0 70 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 RHOVQ96L33 236 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 COL25A1Q9BXS0 654 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-201ENST00000306085 WDR13Q9H1Z4 485 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 TMEM38BQ9NVV0 291 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 SIRT5Q9NXA8 310 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 PPT2Q9UMR5 302 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 KLF13Q9Y2Y9 288 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-201ENST00000306085 CD74P04233 296 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 HKR1P10072 659 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 BRS3P32247 399 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 TMEM101Q96IK0 257 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 PSMG3Q9BT73 122 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-201ENST00000306085 KLF16Q9BXK1 252 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-201ENST00000306085 MPDU1O75352 247 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 HOXD9P28356 352 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-201ENST00000306085 SELENBP1Q13228 472 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 FAM78AQ5JUQ0 283 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 GUCD1Q96NT3 240 aa11.98□□□□□ -0.49
TRIM56-201ENST00000306085 PCNX1Q96RV3 2341 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 PAFAH1B2P68402 229 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 LIAT1Q6ZQX7 453 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 CLEC1BQ9P126 229 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 WNT5AP41221 380 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 GABRG3Q99928 467 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 SLC46A2Q9BY10 475 aa11.97□□□□□ -0.49
TRIM56-201ENST00000306085 CNOT1A5YKK6 2376 aaKnown RBP11.97□□□□□ -0.49
TRIM56-201ENST00000306085 C3orf80F5H4A9 247 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms