RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 FAM90A13PP0C7W8 464 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 FAM90A14PP0C7W9 464 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 FAM90A24PP0C7X0 464 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 CBR1P16152 277 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 CALCRP30988 508 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 PTGER4P35408 488 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 GNG3P63215 75 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 PSG7Q13046 419 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 IKZF1Q13422 519 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 SURF2Q15527 256 aaPredicted RBP5.59□□□□□ -1.52
USP47-201ENST00000305481 FAM76BQ5HYJ3 339 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 TMEM211Q6ICI0 200 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 SLC22A25Q6T423 547 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 MKXQ8IYA7 352 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 C17orf78Q8N4C9 275 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 SLC25A40Q8TBP6 338 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 EXTL1Q92935 676 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 HIST1H2AAQ96QV6 131 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 NECAP2Q9NVZ3 263 aa5.59□□□□□ -1.52
USP47-201ENST00000305481 OR5B21A6NL26 309 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 FAM25EA8MYX2 175 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 TRAPPC2LH3BP13 241 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 WDR1O75083 606 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 ADAP1O75689 374 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 S100A11P31949 105 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 SERPINF1P36955 418 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 MPV17P39210 176 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 IL24Q13007 206 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 LRRC37A5PQ49AS3 106 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 C1orf162Q8NEQ5 155 aaPredicted RBP5.58□□□□□ -1.52
USP47-201ENST00000305481 SNIP1Q8TAD8 396 aaKnown RBP5.58□□□□□ -1.52
USP47-201ENST00000305481 SCGB3A2Q96PL1 93 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 WDR13Q9H1Z4 485 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 ZNF442Q9H7R0 627 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 CDH20Q9HBT6 801 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 PIEZO2Q9H5I5 2752 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 RPS10-NUDT3A0A1W2PQS6 291 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 EEF1E1-BLOC1S5C9J1V9 151 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 NAPSAO96009 420 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 KNG1P01042 644 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 HOXB1P14653 301 aaPredicted RBP5.58□□□□□ -1.52
USP47-201ENST00000305481 RPA2P15927 270 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 MRPL49Q13405 166 aaKnown RBP5.58□□□□□ -1.52
USP47-201ENST00000305481 C11orf87Q6NUJ2 197 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 ZNF600Q6ZNG1 722 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 ZNF546Q86UE3 836 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 ZNF573Q86YE8 665 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 OR8H3Q8N146 312 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 OR1J1Q8NGS3 322 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 KLF14Q8TD94 323 aaPredicted RBP5.58□□□□□ -1.52
USP47-201ENST00000305481 PCNPQ8WW12 178 aaKnown RBP5.58□□□□□ -1.52
USP47-201ENST00000305481 PDCD10Q9BUL8 212 aa5.58□□□□□ -1.52
USP47-201ENST00000305481 CLEC4MQ9H2X3 399 aaPredicted RBP5.58□□□□□ -1.52
USP47-201ENST00000305481 C13orf42A0A1B0GVH6 325 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 H0YL77 283 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 HSPB6O14558 160 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 SLC34A2O95436 690 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 IGLV1-44P01699 117 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 CECR9P0C854 216 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 RAC2P15153 192 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 PGAM2P15259 253 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 GMFBP60983 142 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 TMEM65Q6PI78 240 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 C3P1Q6ZMU1 363 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 C20orf204Q6ZNR8 217 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 MFFQ9GZY8 342 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 RDH8Q9NYR8 311 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 TRAV24A0A0B4J272 114 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 A0A0B4J2A0 478 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 IGHV3-64DA0A0J9YX35 117 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 IQCF6A8MYZ5 107 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 PRSS44E7EML9 344 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 KCNAB3O43448 404 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 CTSDP07339 412 aaPredicted RBP5.57□□□□□ -1.52
USP47-201ENST00000305481 SLC25A4P12235 298 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 SELEP16581 610 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 FCGR2CP31995 323 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 AP2S1P53680 142 aaPredicted RBP5.57□□□□□ -1.52
USP47-201ENST00000305481 FOXC1Q12948 553 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 MPV17LQ2QL34 196 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 SCCPDHQ8NBX0 429 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 OR10C1Q96KK4 312 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 PKIBQ9C010 78 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 ARL6Q9H0F7 186 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 ZNF286AQ9HBT8 521 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 Q9N2K0 584 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 RAB18Q9NP72 206 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 SHPKQ9UHJ6 478 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 TNFSF18Q9UNG2 199 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 PROCRQ9UNN8 238 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 WASF3Q9UPY6 502 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 MAP1BP46821 2468 aaKnown RBP5.57□□□□□ -1.52
USP47-201ENST00000305481 RNF222A6NCQ9 220 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 C5orf51A6NDU8 294 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 CRYM-AS1A6NIL9 109 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 J3QT63 122 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 SNAPC5O75971 98 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 IFNA7P01567 189 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 CRHP06850 196 aa5.57□□□□□ -1.52
USP47-201ENST00000305481 EIF2S3P41091 472 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms