RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 CRYM-AS1A6NIL9 109 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 F8VVB4 439 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 F8VWA3 439 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 ERVH48-1M5A8F1 160 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 OR2F2O95006 317 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 TIMP3P35625 211 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 SERPINF1P36955 418 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 BAMBIQ13145 260 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 OR2F1Q13607 317 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 SPATA46Q5T0L3 261 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 BHLHA15Q7RTS1 189 aaPredicted RBP16.58■□□□□ 0.24
HOXC4-201ENST00000303406 ZNF546Q86UE3 836 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 CXorf67Q86X51 503 aaPredicted RBP16.58■□□□□ 0.24
HOXC4-201ENST00000303406 SGPP2Q8IWX5 399 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 FAM58AQ8N1B3 248 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 ZNF610Q8N9Z0 462 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 PPP1R1CQ8WVI7 109 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 DYRK2Q92630 601 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 MOB3AQ96BX8 217 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 BCL2L14Q9BZR8 327 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 Q9N2K0 584 aa16.58■□□□□ 0.24
HOXC4-201ENST00000303406 CNOT1A5YKK6 2376 aaKnown RBP16.57■□□□□ 0.24
HOXC4-201ENST00000303406 A0A1W2PR80 420 aa16.57■□□□□ 0.24
HOXC4-201ENST00000303406 B3GALNT1O75752 331 aa16.57■□□□□ 0.24
HOXC4-201ENST00000303406 IFNA2P01563 188 aa16.57■□□□□ 0.24
HOXC4-201ENST00000303406 ZNF728P0DKX0 622 aa16.57■□□□□ 0.24
HOXC4-201ENST00000303406 PRKACAP17612 351 aa16.57■□□□□ 0.24
HOXC4-201ENST00000303406 SLC9A3R2Q15599 337 aa16.57■□□□□ 0.24
HOXC4-201ENST00000303406 ANKRD55Q3KP44 614 aa16.57■□□□□ 0.24
HOXC4-201ENST00000303406 C3orf36Q3SXR2 165 aa16.57■□□□□ 0.24
HOXC4-201ENST00000303406 BRICD5Q6PL45 260 aa16.57■□□□□ 0.24
HOXC4-201ENST00000303406 KCNRGQ8N5I3 272 aa16.57■□□□□ 0.24
HOXC4-201ENST00000303406 MARS2Q96GW9 593 aaKnown RBP16.57■□□□□ 0.24
HOXC4-201ENST00000303406 ARL6Q9H0F7 186 aa16.57■□□□□ 0.24
HOXC4-201ENST00000303406 C1orf123Q9NWV4 160 aa16.57■□□□□ 0.24
HOXC4-201ENST00000303406 TRBV6-7A0A0A0MS04 114 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 KIR2DS1A0A191URI9 304 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 OR5H1A6NKK0 313 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 NOS1APO75052 506 aaPredicted RBP16.56■□□□□ 0.24
HOXC4-201ENST00000303406 CTXN2P0C2S0 81 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 PI3P19957 117 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 KITLGP21583 273 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 KIR2DS4P43632 304 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 PSG7Q13046 419 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 RBM39Q14498 530 aaKnown RBP16.56■□□□□ 0.24
HOXC4-201ENST00000303406 KIR2DS1Q14954 304 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 PDCD1Q15116 288 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 Q6ZPA2 131 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 SLC38A6Q8IZM9 456 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 THAP6Q8TBB0 222 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 GALNT14Q96FL9 552 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 SEC22AQ96IW7 307 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 VRK1Q99986 396 aaPredicted RBP16.56■□□□□ 0.24
HOXC4-201ENST00000303406 ADAT1Q9BUB4 502 aaKnown RBP16.56■□□□□ 0.24
HOXC4-201ENST00000303406 LIME1Q9H400 295 aa16.56■□□□□ 0.24
HOXC4-201ENST00000303406 CHMP1AQ9HD42 196 aaPredicted RBP16.56■□□□□ 0.24
HOXC4-201ENST00000303406 RPS10-NUDT3A0A1W2PQS6 291 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 C5orf51A6NDU8 294 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 FAM25EA8MYX2 175 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 CFDP00746 253 aaPredicted RBP16.55■□□□□ 0.24
HOXC4-201ENST00000303406 PSMB6P28072 239 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 RBMXP38159 391 aaKnown RBP16.55■□□□□ 0.24
HOXC4-201ENST00000303406 ERVK11-1P61568 191 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 TSC22D1Q15714 1073 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 SHEQ5VZ18 495 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 ACOT7LQ6ZUV0 252 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 SLC51BQ86UW2 128 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 KLF14Q8TD94 323 aaPredicted RBP16.55■□□□□ 0.24
HOXC4-201ENST00000303406 HS3ST6Q96QI5 342 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 OPN3Q9H1Y3 402 aaPredicted RBP16.55■□□□□ 0.24
HOXC4-201ENST00000303406 WDR13Q9H1Z4 485 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 TREM2Q9NZC2 230 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 FAM215AQ9Y5M1 114 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 AUP1Q9Y679 476 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.55■□□□□ 0.24
HOXC4-201ENST00000303406 FAM221AA4D161 298 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 CECR9P0C854 216 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 LYL1P12980 280 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 FCGR2CP31995 323 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 MDH2P40926 338 aaKnown RBP16.55■□□□□ 0.24
HOXC4-201ENST00000303406 ZNF880Q6PDB4 577 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 OR8H3Q8N146 312 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 SUMF2Q8NBJ7 301 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 FAM57AQ8TBR7 257 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 C2orf50Q96LR7 162 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 RSRP1Q9BUV0 290 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 SFXN3Q9BWM7 321 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 GSX2Q9BZM3 304 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 PURGQ9UJV8 347 aaKnown RBP16.55■□□□□ 0.24
HOXC4-201ENST00000303406 WASF3Q9UPY6 502 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 SLC25A15Q9Y619 301 aa16.55■□□□□ 0.24
HOXC4-201ENST00000303406 ANKRD34BA5PLL1 514 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 EEF1E1-BLOC1S5C9J1V9 151 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 KNG1P01042 644 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 PGA5P0DJD9 388 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 CEACAM8P31997 349 aaPredicted RBP16.54■□□□□ 0.24
HOXC4-201ENST00000303406 RAB14P61106 215 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 ERVS71-1P61550 626 aa16.54■□□□□ 0.24
HOXC4-201ENST00000303406 ZNF324BQ6AW86 544 aaPredicted RBP16.54■□□□□ 0.24
HOXC4-201ENST00000303406 FAM180AQ6UWF9 173 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms