RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 SDCBPO00560 298 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 GPR37O15354 613 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 RECKO95980 971 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 HOXD4P09016 255 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 NME1P15531 152 aaKnown RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 TBXA2RP21731 343 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 WNT3P56703 355 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 CARD18P57730 90 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 SOX4Q06945 474 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 RTN4RL1Q86UN2 441 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 OR4F17Q8NGA8 305 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 OR4D5Q8NGN0 318 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 GPA33Q99795 319 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 LY96Q9Y6Y9 160 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 GVINP1Q7Z2Y8 2422 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 K7EQS6 105 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 KLF8O95600 359 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 ERGP11308 486 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 NMUP48645 174 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 POLR2GP62487 172 aaKnown RBP eCLIP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 ETFDHQ16134 617 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 PRR27Q6MZM9 219 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 TMEM116Q8NCL8 245 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 OR10P1Q8NGE3 313 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 PELI1Q96FA3 418 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 OR2V2Q96R30 315 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 EDA2RQ9HAV5 297 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 OR6C3Q9NZP0 311 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 TMED7-TICAM2A0A0A6YYA0 188 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 A0A0U1RQV5 110 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 A0A1W2PRU2 124 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 UBE2CO00762 179 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 PLPP1O14494 284 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 PIAS2O75928 621 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 METAP1P53582 386 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 RND3P61587 244 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 SELENOTP62341 195 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 PMS2P11Q13670 270 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 LRRC10Q5BKY1 277 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 PRAMEF5Q5TYX0 476 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 PRAMEF6Q5VXH4 476 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 Q6ZNB5 142 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 TBC1D26Q86UD7 250 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 MEX3DQ86XN8 651 aaKnown RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 C10orf126Q8N4M7 172 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 OR5D13Q8NGL4 314 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 SMG9Q9H0W8 520 aaKnown RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 RBKSQ9H477 322 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 PLSCR3Q9NRY6 295 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 GLRX2Q9NS18 164 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 CISD1Q9NZ45 108 aaKnown RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 SLAMF8Q9P0V8 285 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 RCC2Q9P258 522 aaKnown RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 PIGLQ9Y2B2 252 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 DOCK4Q8N1I0 1966 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 TAF1LQ8IZX4 1826 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 ASPDHA6ND91 283 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 HSBP1O75506 76 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 MPGP29372 298 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 GPM6AP51674 278 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 RPS11P62280 158 aaKnown RBP eCLIP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 EBPQ15125 230 aaKnown RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 PARS2Q7L3T8 475 aaKnown RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 CD99L2Q8TCZ2 262 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 WDR89Q96FK6 387 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 PEX11GQ96HA9 241 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 ZNF845Q96IR2 970 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 OR10C1Q96KK4 312 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 TUBD1Q9UJT1 453 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 KLF2Q9Y5W3 355 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 ZNF724A8MTY0 619 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 FGF16O43320 207 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 BCL2P10415 239 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 HTN1P15515 57 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 HIKESHIQ53FT3 197 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 ZNF788Q6ZQV5 615 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 HOGA1Q86XE5 327 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 SMIM8Q96KF7 97 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 ZNF2Q9BSG1 426 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 VN1R3Q9BXE9 311 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 IKZF4Q9H2S9 585 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 ADGRL4Q9HBW9 690 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 CGGBP1Q9UFW8 167 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-201ENST00000303395 MPC1Q9Y5U8 109 aa4.69□□□□□ -1.66
SCN1A-201ENST00000303395 CNOT1A5YKK6 2376 aaKnown RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 C9orf170A2RU37 121 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 IFNL4K9M1U5 179 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 CCSO14618 274 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 PHF1O43189 567 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 SLC25A20O43772 301 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 FAM87AP0C7U9 286 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 BRS3P32247 399 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 YBX1P67809 324 aaKnown RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 ZXDAP98168 799 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 ZP4Q12836 540 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 CPEB2Q7Z5Q1 589 aaKnown RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 TMEM40Q8WWA1 233 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 C2orf88Q9BSF0 95 aa4.68□□□□□ -1.66
SCN1A-201ENST00000303395 PARD6GQ9BYG4 376 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-201ENST00000303395 SELENOIQ9C0D9 397 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms