RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 OR8B3Q8NGG8 313 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 OR8B2Q96RD0 313 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 LAMB1P07942 1786 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 HPXP02790 462 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 GP1BAP07359 652 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 HIST1H1DP16402 221 aaKnown RBP9.25□□□□□ -0.93
CLIP1-201ENST00000302528 KIRREL2Q6UWL6 708 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 OR4P4Q8NGL7 312 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 ZNF519Q8TB69 540 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 NUDT8Q8WV74 236 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 TAF1P21675 1872 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 C11orf94C9JXX5 98 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 KLKB1P03952 638 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 MRPS11P82912 194 aaKnown RBP9.25□□□□□ -0.93
CLIP1-201ENST00000302528 AGERQ15109 404 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 OTOSQ8NHW6 89 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 PRDM7Q9NQW5 492 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 TMSB15BA0A087X1C1 80 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 A0A1W2PPC4 97 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 ACAA1P09110 424 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-201ENST00000302528 PNRC1Q12796 327 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-201ENST00000302528 ABLIM2Q6H8Q1 611 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 MAP6Q96JE9 813 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 TIMP4Q99727 224 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 GPR61Q9BZJ8 451 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 ARAP2Q8WZ64 1704 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 CA2P00918 260 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 CCR5P51681 352 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 GFERP55789 205 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 CDC20Q12834 499 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 SLC16A13Q7RTY0 426 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 LRRC75AQ8NAA5 344 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 RPS4Y2Q8TD47 263 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 BCL2L10Q9HD36 194 aa9.25□□□□□ -0.93
CLIP1-201ENST00000302528 DNAJC25-GNG10A0A024R161 153 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 ZNF815PA8K554 130 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 HIST1H1BP16401 226 aaKnown RBP9.24□□□□□ -0.93
CLIP1-201ENST00000302528 COL19A1Q14993 1142 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 GABRA6Q16445 453 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 TTC32Q5I0X7 151 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 JMJD6Q6NYC1 403 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-201ENST00000302528 FGF20Q9NP95 211 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-201ENST00000302528 ASCL3Q9NQ33 180 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 ECM29Q5VYK3 1845 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 RBFOX3A6NFN3 312 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 NPIPB6E9PJ23 425 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 ISLRO14498 428 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 HAND1O96004 215 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 SPPL3Q8TCT6 385 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 LPAR3Q9UBY5 353 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 SHISA8B8ZZ34 492 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 CD3EP07766 207 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 NCMAPQ5T1S8 102 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 FAM27D1Q5T7N8 215 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 PAQR9Q6ZVX9 377 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 R3HDM4Q96D70 268 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 ADAT3Q96EY9 351 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-201ENST00000302528 TRAV38-1A0A0B4J264 116 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 LINC01553A4QN01 128 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 FAM181BA6NEQ2 426 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 OOEPA6NGQ2 149 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 CDRT15L2A8MXV6 281 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 DHRS3O75911 302 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 APCSP02743 223 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 FAM157CP0CG43 387 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 OR10J1P30954 320 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 PTGFRP43088 359 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 ZNF137PP52743 207 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 PPP1R1AQ13522 171 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 DOK1Q99704 481 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 PRDM14Q9GZV8 571 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 CXXC4Q9H2H0 198 aa9.24□□□□□ -0.93
CLIP1-201ENST00000302528 NDUFB6O95139 128 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 OR5AC1P0C628 307 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 FAM53BQ14153 422 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 CARFQ8N187 725 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 CCL4L1Q8NHW4 92 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 WFDC5Q8TCV5 224 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 FAM222BQ8WU58 562 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 PRSS50Q9UI38 385 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 KCNE3Q9Y6H6 103 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 CDX4O14627 284 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-201ENST00000302528 MT-CO3P00414 261 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 IL24Q13007 206 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 C10orf113Q5VZT2 155 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 MRM1Q6IN84 353 aaKnown RBP9.23□□□□□ -0.93
CLIP1-201ENST00000302528 OR2A5Q96R48 311 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 LOC389332A0A1B0GUA5 103 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 TMPRSS2O15393 492 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 EPPINO95925 133 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 INHBBP09529 407 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 DYNLT3P51808 116 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 CCL7P80098 99 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 DPTQ07507 201 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 C11orf91Q3C1V1 193 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 Q7L0L9 218 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 DEFB123Q8N688 67 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 OR4X1Q8NH49 305 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 FBXL17Q9UF56 701 aa9.23□□□□□ -0.93
CLIP1-201ENST00000302528 COL22A1Q8NFW1 1626 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms