RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 IL13RA2Q14627 380 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 ARL6IP1Q15041 203 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 KCNJ8Q15842 424 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 BAIAP2L2Q6UXY1 529 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 PEG10Q86TG7 708 aaKnown RBP12.66□□□□□ -0.38
UBXN1-202ENST00000301935 OR56B1Q8NGI3 324 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 OR6Q1Q8NGQ2 317 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 OR5H6Q8NGV6 325 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 FAM46BQ96A09 425 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 TMEM106BQ9NUM4 274 aa12.66□□□□□ -0.38
UBXN1-202ENST00000301935 A0A0B4J203 849 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 FAM25AB3EWG3 89 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 FAM25CB3EWG5 89 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 FAM25GB3EWG6 89 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 TMEM178BH3BS89 294 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 KNG1P01042 644 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 HPXP02790 462 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 MUC1P15941 1255 aaPredicted RBP12.65□□□□□ -0.38
UBXN1-202ENST00000301935 PTBP1P26599 531 aaKnown RBP eCLIP12.65□□□□□ -0.38
UBXN1-202ENST00000301935 PMELP40967 661 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 NPBWR2P48146 333 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 PITPNBP48739 271 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 RBM11P57052 281 aaKnown RBP12.65□□□□□ -0.38
UBXN1-202ENST00000301935 TMEM33P57088 247 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 UNC119Q13432 240 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 ZNF146Q15072 292 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 MPV17LQ2QL34 196 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 METAP1DQ6UB28 335 aaPredicted RBP12.65□□□□□ -0.38
UBXN1-202ENST00000301935 ACP7Q6ZNF0 438 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 ZNF826PQ6ZT77 177 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 FAM89BQ8N5H3 189 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 GCSAMQ8N6F7 178 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 S100ZQ8WXG8 99 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 EMG1Q92979 244 aaKnown RBP12.65□□□□□ -0.38
UBXN1-202ENST00000301935 Q96M66 194 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 NKX3-1Q99801 234 aaPredicted RBP12.65□□□□□ -0.38
UBXN1-202ENST00000301935 SELENOIQ9C0D9 397 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 ATG5Q9H1Y0 275 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 SPACA1Q9HBV2 294 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 ST3GAL6Q9Y274 331 aa12.65□□□□□ -0.38
UBXN1-202ENST00000301935 DYSFO75923 2080 aa12.65□□□□□ -0.39
UBXN1-202ENST00000301935 TRAV38-1A0A0B4J264 116 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 IGHV3-64DA0A0J9YX35 117 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 SH2D1BO14796 132 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 NDUFA2O43678 99 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 TCF21O43680 179 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 HPGDSO60760 199 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 GLAP06280 429 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 DAOP14920 347 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 PRKACAP17612 351 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 GIFP27352 417 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 MICBQ29980 383 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 SPRNQ5BIV9 151 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 SPANXN2Q5MJ10 180 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 CMTM4Q8IZR5 234 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 TMEM104Q8NE00 496 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 OR10K1Q8NGX5 313 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 CCL17Q92583 94 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 DIRAS2Q96HU8 199 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 LPAR5Q9H1C0 372 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 BANF2Q9H503 90 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 IFT22Q9H7X7 185 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 RBFOX1Q9NWB1 397 aaKnown RBP12.64□□□□□ -0.39
UBXN1-202ENST00000301935 DNAJB11Q9UBS4 358 aa12.64□□□□□ -0.39
UBXN1-202ENST00000301935 LGALS8O00214 317 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 XRCC3O43542 346 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 ELK1P19419 428 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 IL2RGP31785 369 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 TNFSF8P32971 234 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 ETV6P41212 452 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 TEX36Q5VZQ5 186 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 OR10K2Q6IF99 312 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 LAX1Q8IWV1 398 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 CHST4Q8NCG5 386 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 RAB1CQ92928 201 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 SLC25A38Q96DW6 304 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 TIMD4Q96H15 378 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 C1orf159Q96HA4 380 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 GAL3ST1Q99999 423 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 DNTTIP1Q9H147 329 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 MIXL1Q9H2W2 232 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 NLKQ9UBE8 527 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 HSF4Q9ULV5 492 aa12.63□□□□□ -0.39
UBXN1-202ENST00000301935 PPIAL4EA0A075B759 164 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 OOEPA6NGQ2 149 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 CLDN25C9JDP6 229 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 PPIAL4DF5H284 164 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 EIF4EP06730 217 aaKnown RBP12.62□□□□□ -0.39
UBXN1-202ENST00000301935 PPIAL4FP0DN26 164 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 FUT3P21217 361 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 MNDAP41218 407 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 EFNB2P52799 333 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 PITPNAQ00169 270 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 ZNF45Q02386 682 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 CCDC190Q86UF4 302 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 LINC01356Q8N9X3 169 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 OR10R2Q8NGX6 335 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 ZNF488Q96MN9 340 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 NEDD4LQ96PU5 975 aa12.62□□□□□ -0.39
UBXN1-202ENST00000301935 WIPI2Q9Y4P8 454 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms