RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 GNMTQ14749 295 aa9.46□□□□□ -0.89
ZNF558-201ENST00000301475 HLA-DQA1Q5Y7H0 255 aa9.46□□□□□ -0.89
ZNF558-201ENST00000301475 TCEAL6Q6IPX3 200 aa9.46□□□□□ -0.89
ZNF558-201ENST00000301475 ZNF880Q6PDB4 577 aa9.46□□□□□ -0.89
ZNF558-201ENST00000301475 MEX3BQ6ZN04 569 aaKnown RBP9.46□□□□□ -0.89
ZNF558-201ENST00000301475 LGI3Q8N145 548 aa9.46□□□□□ -0.89
ZNF558-201ENST00000301475 OR5C1Q8NGR4 320 aa9.46□□□□□ -0.89
ZNF558-201ENST00000301475 Q96M66 194 aa9.46□□□□□ -0.89
ZNF558-201ENST00000301475 TP53RKQ96S44 253 aa9.46□□□□□ -0.89
ZNF558-201ENST00000301475 FER1L5A0AVI2 2057 aa9.46□□□□□ -0.89
ZNF558-201ENST00000301475 NKX2-6A6NCS4 301 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 B4DGG1 531 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 PROB1E7EW31 1015 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 CST7O76096 145 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 JMJD7P0C870 316 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 DMDP11532 3685 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 G0S2P27469 103 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 COL13A1Q5TAT6 717 aaPredicted RBP9.46□□□□□ -0.9
ZNF558-201ENST00000301475 C20orf196Q8IYI0 205 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 WDFY3Q8IZQ1 3526 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 OR4X1Q8NH49 305 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 OR6X1Q8NH79 312 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 RNASEH2CQ8TDP1 164 aaKnown RBP9.46□□□□□ -0.9
ZNF558-201ENST00000301475 HAS2Q92819 552 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 RAB24Q969Q5 203 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 NOL4LQ96MY1 436 aaPredicted RBP9.46□□□□□ -0.9
ZNF558-201ENST00000301475 FAM86C1Q9NVL1 165 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 RALGAPA1Q6GYQ0 2036 aa9.46□□□□□ -0.9
ZNF558-201ENST00000301475 LOC102723971A0A1B0GUV8 181 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 CLDN34H7C241 214 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 POU2F2P09086 479 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 PGA3P0DJD8 388 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 CTSEP14091 401 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 FOLR1P15328 257 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 RAB11AP62491 216 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 SMAD4Q13485 552 aaKnown RBP9.45□□□□□ -0.9
ZNF558-201ENST00000301475 PPA1Q15181 289 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 CARD17Q5XLA6 110 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 PRSS58Q8IYP2 241 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 TMEM252Q8N6L7 170 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 BEND2Q8NDZ0 799 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 NOXO1Q8NFA2 376 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 GABRG3Q99928 467 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 MAGT1Q9H0U3 335 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 NECAP2Q9NVZ3 263 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 TRBV24-1A0A075B6N3 115 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 LIPT2A6NK58 231 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 ZNF732B4DXR9 585 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 SLC33A1O00400 549 aaPredicted RBP9.45□□□□□ -0.9
ZNF558-201ENST00000301475 SSSCA1O60232 199 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 TMEM50AO95807 157 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 CYB5R3P00387 301 aaPredicted RBP9.45□□□□□ -0.9
ZNF558-201ENST00000301475 CD55P08174 381 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 PPM1FP49593 454 aaPredicted RBP9.45□□□□□ -0.9
ZNF558-201ENST00000301475 DYNLT3P51808 116 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 TNFRSF9Q07011 255 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 TAF9Q16594 264 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 ABLIM2Q6H8Q1 611 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 TMEM217Q8N7C4 229 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 ACTR3CQ9C0K3 210 aaPredicted RBP9.45□□□□□ -0.9
ZNF558-201ENST00000301475 ASCC3Q8N3C0 2202 aaKnown RBP9.45□□□□□ -0.9
ZNF558-201ENST00000301475 CHD3Q12873 2000 aaKnown RBP9.45□□□□□ -0.9
ZNF558-201ENST00000301475 CCDC163A0A0D9SF12 145 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 SHISA7A6NL88 538 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 ANGPTL7O43827 346 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 TNFP01375 233 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 IGFBP4P22692 258 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 CLRN1P58418 232 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 DCAF7P61962 342 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 COL10A1Q03692 680 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 ARL6IP1Q15041 203 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 NKAIN1Q4KMZ8 207 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 THEM4Q5T1C6 240 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 RTL6Q6ICC9 239 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 BRICD5Q6PL45 260 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 OR5L2Q8NGL0 311 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 SNHG12Q9BXW3 62 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 OBP2AQ9NY56 170 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 GNG13Q9P2W3 67 aa9.45□□□□□ -0.9
ZNF558-201ENST00000301475 EXPH5Q8NEV8 1989 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 ZNF705GA8MUZ8 300 aaPredicted RBP9.44□□□□□ -0.9
ZNF558-201ENST00000301475 B4DEV8 164 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 IGLV3-1P01715 115 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 OPN1LWP04000 364 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 HOXA6P31267 233 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 ZNF133P52736 654 aaPredicted RBP9.44□□□□□ -0.9
ZNF558-201ENST00000301475 GFERP55789 205 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 SLC10A1Q14973 349 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 LANCL3Q6ZV70 420 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 CMTM1Q8IZ96 169 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 OR1P1Q8NH06 330 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 RBMXL1Q96E39 390 aaKnown RBP9.44□□□□□ -0.9
ZNF558-201ENST00000301475 LYRM2Q9NU23 88 aaPredicted RBP9.44□□□□□ -0.9
ZNF558-201ENST00000301475 SOHLH2Q9NX45 425 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 HSPA12AO43301 675 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 EFNA2O43921 213 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 MMP9P14780 707 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 NKX2-1P43699 371 aaPredicted RBP9.44□□□□□ -0.9
ZNF558-201ENST00000301475 FOXL2P58012 376 aa9.44□□□□□ -0.9
ZNF558-201ENST00000301475 RELQ04864 619 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms