RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 RBM39Q14498 530 aaKnown RBP13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 SPIN3Q5JUX0 258 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 ZDHHC22Q8N966 263 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 OR13C8Q8NGS7 320 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 LILRB4Q8NHJ6 448 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 NEK7Q8TDX7 302 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 MRPL24Q96A35 216 aaKnown RBP13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 ST6GAL2Q96JF0 529 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 ALX4Q9H161 411 aaPredicted RBP13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 CA10Q9NS85 328 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 EHFQ9NZC4 300 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 NDRG3Q9UGV2 375 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 ANXA10Q9UJ72 324 aa13.33□□□□□ -0.28
HERPUD1-201ENST00000300302 IGHV3-64DA0A0J9YX35 117 aa13.32□□□□□ -0.28
HERPUD1-201ENST00000300302 SNRPGP15A8MWD9 76 aa13.32□□□□□ -0.28
HERPUD1-201ENST00000300302 DEGS1O15121 323 aa13.32□□□□□ -0.28
HERPUD1-201ENST00000300302 CREBL2O60519 120 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-201ENST00000300302 CDK10Q15131 360 aa13.32□□□□□ -0.28
HERPUD1-201ENST00000300302 TERB2Q8NHR7 220 aa13.32□□□□□ -0.28
HERPUD1-201ENST00000300302 DYRK2Q92630 601 aa13.32□□□□□ -0.28
HERPUD1-201ENST00000300302 MRPL37Q9BZE1 423 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-201ENST00000300302 PPA2Q9H2U2 334 aa13.32□□□□□ -0.28
HERPUD1-201ENST00000300302 ESRP2Q9H6T0 727 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-201ENST00000300302 ZNF286AQ9HBT8 521 aa13.32□□□□□ -0.28
HERPUD1-201ENST00000300302 CHMP1AQ9HD42 196 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-201ENST00000300302 TAAR3PQ9P1P4 343 aa13.32□□□□□ -0.28
HERPUD1-201ENST00000300302 POLEQ07864 2286 aa13.32□□□□□ -0.28
HERPUD1-201ENST00000300302 VSTM5A8MXK1 200 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 ZNF44P15621 663 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 ADORA2A-AS1P86434 159 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 CD83Q01151 205 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 GRK1Q15835 563 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 PRAMEF6Q5VXH4 476 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 OVCH2Q7RTZ1 564 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 SLC36A1Q7Z2H8 476 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 C11orf53Q8IXP5 236 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 SUMF2Q8NBJ7 301 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 CA5BP1Q8WTZ4 195 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 GTF3AQ92664 365 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 ELMOD3Q96FG2 381 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 RIMS4Q9H426 269 aaPredicted RBP13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 HES4Q9HCC6 221 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 MYOZ1Q9NP98 299 aaPredicted RBP13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 GLS2Q9UI32 602 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 ATP23Q9Y6H3 246 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 ZSCAN5BA6NJL1 495 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 A8MV72 311 aaPredicted RBP13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 SH2D1BO14796 132 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 HPXP02790 462 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 ZNF146Q15072 292 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 MPPED2Q15777 294 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 SRSF7Q16629 238 aaKnown RBP eCLIP13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 ATPAF1Q5TC12 328 aaPredicted RBP13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 ZNF626Q68DY1 528 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 WDR82Q6UXN9 313 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 TMED4Q7Z7H5 227 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 SCGB3A2Q96PL1 93 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 SEC22CQ9BRL7 303 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 DPCDQ9BVM2 203 aaPredicted RBP13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 RANGRFQ9HD47 186 aaPredicted RBP13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 UFSP2Q9NUQ7 469 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 NECAP2Q9NVZ3 263 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 ZNF69Q9UC07 566 aa13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 ERRFI1Q9UJM3 462 aaPredicted RBP13.31□□□□□ -0.28
HERPUD1-201ENST00000300302 PKD1L2Q7Z442 2459 aa13.3□□□□□ -0.28
HERPUD1-201ENST00000300302 hCG_1807616A0A1W2PRN6 198 aa13.3□□□□□ -0.28
HERPUD1-201ENST00000300302 FAM221AA4D161 298 aa13.3□□□□□ -0.28
HERPUD1-201ENST00000300302 HS3ST1O14792 307 aa13.3□□□□□ -0.28
HERPUD1-201ENST00000300302 PTBP3O95758 552 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-201ENST00000300302 FCN2Q15485 313 aa13.3□□□□□ -0.28
HERPUD1-201ENST00000300302 C4orf46Q504U0 113 aa13.3□□□□□ -0.28
HERPUD1-201ENST00000300302 KCNJ16Q9NPI9 418 aa13.3□□□□□ -0.28
HERPUD1-201ENST00000300302 ZDHHC8Q9ULC8 765 aa13.3□□□□□ -0.28
HERPUD1-201ENST00000300302 IGKV1D-8A0A087WSZ0 117 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 TRAV24A0A0B4J272 114 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 NKX2-6A6NCS4 301 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 OR2AT4A6NND4 320 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 SDCBPO00560 298 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 HSPB6O14558 160 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 VSIG10L2P0DP72 767 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 ZNF81P51508 661 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 GMFBP60983 142 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 SORDQ00796 357 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 Q6P435 159 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 ZNF826PQ6ZT77 177 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 RDH5Q92781 318 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 C1orf123Q9NWV4 160 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 VSIG4Q9Y279 399 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 ATXN7O15265 892 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 SPRY3O43610 288 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 NAPSAO96009 420 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 OR4E1P0C645 316 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 GLRA1P23415 457 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 TNFSF4P23510 183 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 MDH2P40926 338 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 ECI1P42126 302 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 SMIM21Q3B7S5 101 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 ZFP69Q49AA0 526 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 NCMAPQ5T1S8 102 aa13.29□□□□□ -0.28
HERPUD1-201ENST00000300302 Q6ZS49 121 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms