RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 FAM90A1Q86YD7 464 aa17.45■□□□□ 0.38
PACSIN3-201ENST00000298838 CLEC18CQ8NCF0 446 aa17.45■□□□□ 0.38
PACSIN3-201ENST00000298838 VRK1Q99986 396 aaPredicted RBP17.45■□□□□ 0.38
PACSIN3-201ENST00000298838 SULT4A1Q9BR01 284 aa17.45■□□□□ 0.38
PACSIN3-201ENST00000298838 UBTD1Q9HAC8 227 aa17.45■□□□□ 0.38
PACSIN3-201ENST00000298838 PLEKHA6Q9Y2H5 1048 aa17.45■□□□□ 0.38
PACSIN3-201ENST00000298838 SH2D1BO14796 132 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 DEGS1O15121 323 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 SSX5O60225 188 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 SOD3P08294 240 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 DANCRP0C864 163 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 C11orf71Q6IPW1 123 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 BOLLQ8N9W6 283 aaKnown RBP17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 CYYR1Q96J86 154 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 COX4I2Q96KJ9 171 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 DNAJB11Q9UBS4 358 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 OR14J1Q9UGF5 321 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 HAND1O96004 215 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 CSF1P09603 554 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 KLF9Q13886 244 aaPredicted RBP17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 BRICD5Q6PL45 260 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 IFT46Q9NQC8 304 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 TREM2Q9NZC2 230 aa17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 RAI1Q7Z5J4 1906 aaPredicted RBP17.44■□□□□ 0.38
PACSIN3-201ENST00000298838 LRBAP50851 2863 aa17.43■□□□□ 0.38
PACSIN3-201ENST00000298838 FAM221AA4D161 298 aa17.43■□□□□ 0.38
PACSIN3-201ENST00000298838 MCRIP1C9JLW8 97 aa17.43■□□□□ 0.38
PACSIN3-201ENST00000298838 PLA2G10O15496 165 aa17.43■□□□□ 0.38
PACSIN3-201ENST00000298838 CLDN1O95832 211 aa17.43■□□□□ 0.38
PACSIN3-201ENST00000298838 OR2H2O95918 312 aa17.43■□□□□ 0.38
PACSIN3-201ENST00000298838 CD8AP01732 235 aa17.43■□□□□ 0.38
PACSIN3-201ENST00000298838 Q6P435 159 aa17.43■□□□□ 0.38
PACSIN3-201ENST00000298838 DCDC5Q6ZRR9 648 aa17.43■□□□□ 0.38
PACSIN3-201ENST00000298838 SUMF2Q8NBJ7 301 aa17.43■□□□□ 0.38
PACSIN3-201ENST00000298838 CMSS1Q9BQ75 279 aaKnown RBP17.43■□□□□ 0.38
PACSIN3-201ENST00000298838 AK3Q9UIJ7 227 aa17.43■□□□□ 0.38
PACSIN3-201ENST00000298838 TANC2Q9HCD6 1990 aa17.43■□□□□ 0.38
PACSIN3-201ENST00000298838 TRAV24A0A0B4J272 114 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 ANKRD20A5PA0PJZ0 165 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 UBE2QL1A1L167 161 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 HSPB6O14558 160 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 LYRM1O43325 122 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 PTTG1O95997 202 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 CYB5R3P00387 301 aaPredicted RBP17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 RCVRNP35243 200 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 RBMXP38159 391 aaKnown RBP17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 CBX5P45973 191 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 DYRK1AQ13627 763 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 RBM39Q14498 530 aaKnown RBP17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 C1orf87Q8N0U7 546 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 NEK7Q8TDX7 302 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 TRAF4Q9BUZ4 470 aaPredicted RBP17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 DPCDQ9BVM2 203 aaPredicted RBP17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 RAB1BQ9H0U4 201 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 C11orf54Q9H0W9 315 aaPredicted RBP17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 NLKQ9UBE8 527 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 LAMP3Q9UQV4 416 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 CACNG2Q9Y698 323 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 A1L4Q6 167 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 CENPXA8MT69 81 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 VGLL3A8MV65 326 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 SIRPB1O00241 398 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 GLAP06280 429 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 MZT2BQ6NZ67 158 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 DEDD2Q8WXF8 326 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 RDH5Q92781 318 aa17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 ZNF107Q9UII5 783 aaPredicted RBP17.42■□□□□ 0.38
PACSIN3-201ENST00000298838 IGHV1-69-2A0A0G2JMI3 117 aa17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 RFPL4AA6NLU0 287 aa17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 OR2AT4A6NND4 320 aa17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 RFPL4AL1F8VTS6 287 aa17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 IFNL4K9M1U5 179 aa17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 SLC33A1O00400 549 aaPredicted RBP17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 HPXP02790 462 aa17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 FCER2P06734 321 aa17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 TGIF2LYQ8IUE0 185 aa17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 GVQW1Q8N7I0 195 aa17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 OCSTAMPQ9BR26 566 aa17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 C7orf50Q9BRJ6 194 aaKnown RBP17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 CLEC4MQ9H2X3 399 aaPredicted RBP17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 C12orf4Q9NQ89 552 aa17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 WIPI2Q9Y4P8 454 aa17.41■□□□□ 0.38
PACSIN3-201ENST00000298838 COX6B1P14854 86 aa17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 CEBPDP49716 269 aaPredicted RBP17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 TAS2R19P59542 299 aa17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 TLE4Q04727 773 aa17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 MICBQ29980 383 aa17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 TRIM16LQ309B1 348 aa17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 PAN3Q58A45 887 aaKnown RBP17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 SFRP4Q6FHJ7 346 aaPredicted RBP17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 CHPT1Q8WUD6 406 aa17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 CCL17Q92583 94 aa17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 DYRK2Q92630 601 aa17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 HDHD3Q9BSH5 251 aaPredicted RBP17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 CACNG6Q9BXT2 260 aa17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 TMEM106BQ9NUM4 274 aa17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 ZNF701Q9NV72 531 aaPredicted RBP17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 IGHV3OR15-7A0A075B7D8 119 aa17.4■□□□□ 0.38
PACSIN3-201ENST00000298838 PSG2P11465 335 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms