RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 C18orf12Q96KH6 178 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 OR2H1Q9GZK4 316 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 HSF4Q9ULV5 492 aa21.07■□□□□ 0.96
SPTSSA-201ENST00000298130 A0A1W2PPH5 198 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 GLAP06280 429 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 ZNF44P15621 663 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 DAZAP2Q15038 168 aaPredicted RBP21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 LHFPL2Q6ZUX7 228 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 DMBX1Q8NFW5 382 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 PAPOLGQ9BWT3 736 aaKnown RBP21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 RGCCQ9H4X1 137 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 PLEKHA2Q9HB19 425 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 ZNF286AQ9HBT8 521 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 SH2D2AQ9NP31 389 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 SMCO4Q9NRQ5 59 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 hCG_1809904A0A1W2PP81 198 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 A0A1W2PR64 198 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 A0A1W2PRV1 198 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 EIF3GO75821 320 aaKnown RBP eCLIP21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 HERV-K104P61576 105 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 POLR2GP62487 172 aaKnown RBP eCLIP21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 Q0VFX4 171 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 CPEB3Q8NE35 698 aaKnown RBP21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 C10orf35Q96D05 121 aa21.06■□□□□ 0.96
SPTSSA-201ENST00000298130 hCG_38984A0A1B0GV85 526 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 C7orf77A4D0Y5 90 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 DANCRP0C864 163 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 TCN2P20062 427 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 DTYMKP23919 212 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 CEBPGP53567 150 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 MALLQ13021 153 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 HIST1H2BAQ96A08 127 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 RARRES2Q99969 163 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 DEPPQ9NTK1 212 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 PINLYPA6NC86 204 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 OR6C6A6NF89 314 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 CST2P09228 141 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 IGFBP7Q16270 282 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 GALNT14Q96FL9 552 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 RSRP1Q9BUV0 290 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 C19orf12Q9NSK7 152 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 SLC7A11Q9UPY5 501 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 STARD10Q9Y365 291 aa21.05■□□□□ 0.96
SPTSSA-201ENST00000298130 CDRT15L2A8MXV6 281 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 H7C1Q1 480 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 TERTO14746 1132 aaKnown RBP21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 ST8SIA3O43173 380 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 GPR137BO60478 399 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 P04436 131 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 HEXAP06865 529 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 OR2Y1Q8NGV0 311 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 SLAMF9Q96A28 289 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 SCRT1Q9BWW7 348 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 SMOC1Q9H4F8 434 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 TIMM10BQ9Y5J6 103 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 PRRC2CQ9Y520 2896 aaKnown RBP21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 LINC01387J3KSC0 135 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 TNFSF12O43508 249 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 FOXG1P55316 489 aaPredicted RBP21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 EIF3IQ13347 325 aaKnown RBP21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 IL11RAQ14626 422 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 HPSE2Q8WWQ2 592 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 USB1Q9BQ65 265 aaKnown RBP21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 SLC7A10Q9NS82 523 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 R4GN57 208 aa21.04■□□□□ 0.96
SPTSSA-201ENST00000298130 BORCS7-ASMTA0A0B4J1R7 106 aa21.03■□□□□ 0.96
SPTSSA-201ENST00000298130 PDCD6O75340 191 aa21.03■□□□□ 0.96
SPTSSA-201ENST00000298130 PPYP01298 95 aa21.03■□□□□ 0.96
SPTSSA-201ENST00000298130 SLC16A13Q7RTY0 426 aa21.03■□□□□ 0.96
SPTSSA-201ENST00000298130 LGI3Q8N145 548 aa21.03■□□□□ 0.96
SPTSSA-201ENST00000298130 NAT6Q93015 286 aa21.03■□□□□ 0.96
SPTSSA-201ENST00000298130 SCTP09683 121 aa21.03■□□□□ 0.96
SPTSSA-201ENST00000298130 P2RY1P47900 373 aa21.03■□□□□ 0.96
SPTSSA-201ENST00000298130 CCL20P78556 96 aa21.03■□□□□ 0.96
SPTSSA-201ENST00000298130 TMEM217Q8N7C4 229 aa21.03■□□□□ 0.96
SPTSSA-201ENST00000298130 MOB3AQ96BX8 217 aa21.03■□□□□ 0.96
SPTSSA-201ENST00000298130 INTS12Q96CB8 462 aaKnown RBP21.03■□□□□ 0.96
SPTSSA-201ENST00000298130 NTNG2Q96CW9 530 aa21.03■□□□□ 0.96
SPTSSA-201ENST00000298130 A0A1W2PPE2 198 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 PDGFBP01127 241 aaPredicted RBP21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 BCL3P20749 454 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 FOLR3P41439 243 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 GLP1RP43220 463 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 RBM11P57052 281 aaKnown RBP21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 TSC22D1Q15714 1073 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 CXorf66Q5JRM2 361 aaPredicted RBP21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 M1APQ8TC57 530 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 CLDN23Q96B33 292 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 LUZP4Q9P127 313 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 PILRBQ9UKJ0 227 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 TNRC18O15417 2968 aaPredicted RBP21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 UMAD1C9J7I0 102 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 MEOX2P50222 304 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 FAM24BQ8N5W8 94 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 ZFP62Q8NB50 900 aaPredicted RBP21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 LYPD6BQ8NI32 183 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 SUCNR1Q9BXA5 334 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 GPR35Q9HC97 309 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 KPTNQ9Y664 436 aa21.02■□□□□ 0.96
SPTSSA-201ENST00000298130 C3orf85A0A1B0GTC6 90 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms