RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SFT2D2O95562 160 aa15.34■□□□□ 0.05
CAPN1-201ENST00000279247 ZNF44P15621 663 aa15.34■□□□□ 0.05
CAPN1-201ENST00000279247 PTGER4P35408 488 aa15.34■□□□□ 0.05
CAPN1-201ENST00000279247 PLEKHN1Q494U1 663 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-201ENST00000279247 IGF2-ASQ6U949 168 aa15.34■□□□□ 0.05
CAPN1-201ENST00000279247 GSG1LQ6UXU4 331 aa15.34■□□□□ 0.05
CAPN1-201ENST00000279247 ZNF286AQ9HBT8 521 aa15.34■□□□□ 0.05
CAPN1-201ENST00000279247 DKK4Q9UBT3 224 aa15.34■□□□□ 0.05
CAPN1-201ENST00000279247 MPV17P39210 176 aa15.34■□□□□ 0.05
CAPN1-201ENST00000279247 RTL6Q6ICC9 239 aa15.34■□□□□ 0.05
CAPN1-201ENST00000279247 PRR18Q8N4B5 295 aa15.34■□□□□ 0.05
CAPN1-201ENST00000279247 OR5A2Q8NGI9 324 aa15.34■□□□□ 0.05
CAPN1-201ENST00000279247 MRPS24Q96EL2 167 aaKnown RBP15.34■□□□□ 0.05
CAPN1-201ENST00000279247 TINAGQ9UJW2 476 aa15.34■□□□□ 0.05
CAPN1-201ENST00000279247 GNG3P63215 75 aa15.33■□□□□ 0.05
CAPN1-201ENST00000279247 ABCA11PQ4W5N1 156 aa15.33■□□□□ 0.05
CAPN1-201ENST00000279247 OR11L1Q8NGX0 322 aa15.33■□□□□ 0.05
CAPN1-201ENST00000279247 SCGB3A2Q96PL1 93 aa15.33■□□□□ 0.05
CAPN1-201ENST00000279247 CDIPTO14735 213 aa15.33■□□□□ 0.04
CAPN1-201ENST00000279247 PIGPP57054 158 aa15.33■□□□□ 0.04
CAPN1-201ENST00000279247 FGF12P61328 243 aa15.33■□□□□ 0.04
CAPN1-201ENST00000279247 GP6Q9HCN6 339 aa15.33■□□□□ 0.04
CAPN1-201ENST00000279247 OBP2BQ9NPH6 170 aa15.33■□□□□ 0.04
CAPN1-201ENST00000279247 GLRX2Q9NS18 164 aa15.33■□□□□ 0.04
CAPN1-201ENST00000279247 IL36GQ9NZH8 169 aa15.33■□□□□ 0.04
CAPN1-201ENST00000279247 UCP2P55851 309 aa15.33■□□□□ 0.04
CAPN1-201ENST00000279247 S100A10P60903 97 aa15.33■□□□□ 0.04
CAPN1-201ENST00000279247 RAB14P61106 215 aa15.33■□□□□ 0.04
CAPN1-201ENST00000279247 C11orf87Q6NUJ2 197 aa15.33■□□□□ 0.04
CAPN1-201ENST00000279247 THAP6Q8TBB0 222 aa15.33■□□□□ 0.04
CAPN1-201ENST00000279247 WNT2BQ93097 391 aa15.33■□□□□ 0.04
CAPN1-201ENST00000279247 OR10C1Q96KK4 312 aa15.33■□□□□ 0.04
CAPN1-201ENST00000279247 MEX3AA1L020 520 aaKnown RBP15.32■□□□□ 0.04
CAPN1-201ENST00000279247 CEACAM4O75871 244 aa15.32■□□□□ 0.04
CAPN1-201ENST00000279247 PSG7Q13046 419 aa15.32■□□□□ 0.04
CAPN1-201ENST00000279247 FAHD2BQ6P2I3 314 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-201ENST00000279247 PEG10Q86TG7 708 aaKnown RBP15.32■□□□□ 0.04
CAPN1-201ENST00000279247 FAHD2AQ96GK7 314 aa15.32■□□□□ 0.04
CAPN1-201ENST00000279247 ADAT1Q9BUB4 502 aaKnown RBP15.32■□□□□ 0.04
CAPN1-201ENST00000279247 PROCRQ9UNN8 238 aa15.32■□□□□ 0.04
CAPN1-201ENST00000279247 POLEQ07864 2286 aa15.32■□□□□ 0.04
CAPN1-201ENST00000279247 SCTP09683 121 aa15.32■□□□□ 0.04
CAPN1-201ENST00000279247 ZNF728P0DKX0 622 aa15.32■□□□□ 0.04
CAPN1-201ENST00000279247 C4BPBP20851 252 aa15.32■□□□□ 0.04
CAPN1-201ENST00000279247 DHODHQ02127 395 aa15.32■□□□□ 0.04
CAPN1-201ENST00000279247 SEM1Q6ZVN7 128 aa15.32■□□□□ 0.04
CAPN1-201ENST00000279247 RBMXL3Q8N7X1 1067 aaKnown RBP15.32■□□□□ 0.04
CAPN1-201ENST00000279247 TMEM185AQ8NFB2 350 aa15.32■□□□□ 0.04
CAPN1-201ENST00000279247 VRK1Q99986 396 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-201ENST00000279247 UFSP2Q9NUQ7 469 aa15.32■□□□□ 0.04
CAPN1-201ENST00000279247 HMSDA8MTL9 139 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 SIRPB1O00241 398 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 PPA1Q15181 289 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 ZNF573Q86YE8 665 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 RELL2Q8NC24 303 aaPredicted RBP15.31■□□□□ 0.04
CAPN1-201ENST00000279247 DCUN1D4Q92564 292 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 MSL2Q9HCI7 577 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 OR14J1Q9UGF5 321 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 EDARQ9UNE0 448 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 PKDREJQ9NTG1 2253 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 CDK2AP1O14519 115 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 TNFSF13O75888 250 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 DTYMKP23919 212 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 ZNF826PQ6ZT77 177 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 WDR86Q86TI4 376 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 SPACA3Q8IXA5 215 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 WDR31Q8NA23 367 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 STARD4Q96DR4 205 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 MPC1Q9Y5U8 109 aa15.31■□□□□ 0.04
CAPN1-201ENST00000279247 TFF1P04155 84 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 SPIN3Q5JUX0 258 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 FAM74A1Q5RGS3 127 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 UNQ6126/PRO20091Q6UXV3 157 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 SGPP2Q8IWX5 399 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 FAM58AQ8N1B3 248 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 OR6K3Q8NGY3 331 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 KLF14Q8TD94 323 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-201ENST00000279247 LHX6Q9UPM6 363 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 A6NLC8 198 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 SCGB1D2O95969 90 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 CECR9P0C854 216 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 RPS2P15880 293 aaKnown RBP15.3■□□□□ 0.04
CAPN1-201ENST00000279247 AADACP22760 399 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 GLP1RP43220 463 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 CEBPDP49716 269 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-201ENST00000279247 HERV-K104P61576 105 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 FGL1Q08830 312 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 LPCAT3Q6P1A2 487 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 SECTM1Q8WVN6 248 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 IL1F10Q8WWZ1 152 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 ABHD17AQ96GS6 310 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 ZNF471Q9BX82 626 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-201ENST00000279247 CA11O75493 328 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 IFNA2P01563 188 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 CD8AP01732 235 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 RCC1P18754 421 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-201ENST00000279247 ZNF660Q6AZW8 331 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-201ENST00000279247 VHLLQ6RSH7 139 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 SUMF2Q8NBJ7 301 aa15.3■□□□□ 0.04
CAPN1-201ENST00000279247 GALNT11Q8NCW6 608 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms