RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 EPGNQ6UW88 154 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 APLFQ8IW19 511 aaPredicted RBP3.71□□□□□ -1.82
CD44-202ENST00000278385 LRRC25Q8N386 305 aaPredicted RBP3.71□□□□□ -1.82
CD44-202ENST00000278385 SPICQ8N5J4 248 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 PIFOQ8TCI5 191 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 TMEM234Q8WY98 164 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 FGGYQ96C11 551 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 MED8Q96G25 268 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 WBP1Q96G27 269 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 SFRP2Q96HF1 295 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 UBE2E2Q96LR5 201 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 DOK1Q99704 481 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 KCTD14Q9BQ13 255 aaPredicted RBP3.71□□□□□ -1.82
CD44-202ENST00000278385 LRRC61Q9BV99 259 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 SLC19A3Q9BZV2 496 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 NMUR2Q9GZQ4 415 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 ALX4Q9H161 411 aaPredicted RBP3.71□□□□□ -1.82
CD44-202ENST00000278385 TCEAL2Q9H3H9 227 aaPredicted RBP3.71□□□□□ -1.82
CD44-202ENST00000278385 MAP1LC3AQ9H492 121 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 NT5DC2Q9H857 520 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 TAS2R13Q9NYV9 303 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 ZNF224Q9NZL3 707 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 VPREB3Q9UKI3 123 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 PPP2R2CQ9Y2T4 447 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 OR51B2Q9Y5P1 312 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 U3KQA8 63 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 RALGAPA1Q6GYQ0 2036 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 SPAG17Q6Q759 2223 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 DCHS1Q96JQ0 3298 aa3.71□□□□□ -1.82
CD44-202ENST00000278385 TNRC6BQ9UPQ9 1833 aaKnown RBP3.7□□□□□ -1.82
CD44-202ENST00000278385 NUP205Q92621 2012 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 GON4LQ3T8J9 2241 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 ISPDA4D126 451 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 CLDN24A6NM45 220 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 SYCE1LA8MT33 242 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 OR11H12B2RN74 326 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 ZNF587BE7ETH6 402 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 LOC110117498-PIK3R3F6TDL0 507 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 C15orf65H3BRN8 121 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 M0R1B8 84 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 NTN3O00634 580 aaPredicted RBP3.7□□□□□ -1.82
CD44-202ENST00000278385 TAAR5O14804 337 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 ARPC5O15511 151 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 RAD51CO43502 376 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 MFSD11O43934 449 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 PTTG1O95997 202 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 HAND1O96004 215 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 ARG1P05089 322 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 TFPTP0C1Z6 253 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 ICAM2P13598 275 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 BCL3P20749 454 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 SLC2A5P22732 501 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 GPR183P32249 361 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 SPINT3P49223 89 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 FABP6P51161 128 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 DLX1P56177 255 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 TCL1AP56279 114 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 PPP1CBP62140 327 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 RPS27AP62979 156 aaKnown RBP3.7□□□□□ -1.82
CD44-202ENST00000278385 EIF3IQ13347 325 aaKnown RBP3.7□□□□□ -1.82
CD44-202ENST00000278385 APOFQ13790 326 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 OR1Q1Q15612 314 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 ZNF726P1Q15940 193 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 C4orf26Q17RF5 130 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 C14orf28Q4W4Y0 310 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 GPRC6AQ5T6X5 926 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 C8orf82Q6P1X6 216 aaPredicted RBP3.7□□□□□ -1.82
CD44-202ENST00000278385 C19orf48Q6RUI8 117 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 APOOLQ6UXV4 268 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 TFAP2EQ6VUC0 442 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 CYHR1Q6ZMK1 362 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 ARRDC1Q8N5I2 433 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 CLDN22Q8N7P3 220 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 HSD17B11Q8NBQ5 300 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 KBTBD8Q8NFY9 601 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 OR11H1Q8NG94 326 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 OR4K17Q8NGC6 315 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 OR11H2Q8NH07 326 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 OR56B4Q8NH76 319 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 TMEM159Q96B96 161 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 IMP4Q96G21 291 aaKnown RBP3.7□□□□□ -1.82
CD44-202ENST00000278385 SCMH1Q96GD3 660 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 ALKBH3Q96Q83 286 aaPredicted RBP3.7□□□□□ -1.82
CD44-202ENST00000278385 LYSMD1Q96S90 227 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 ZNF717Q9BY31 904 aaPredicted RBP3.7□□□□□ -1.82
CD44-202ENST00000278385 YTHDF1Q9BYJ9 559 aaKnown RBP3.7□□□□□ -1.82
CD44-202ENST00000278385 ZNF442Q9H7R0 627 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 PLAC1Q9HBJ0 212 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 FGF22Q9HCT0 170 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 FAM206AQ9NX38 181 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 SLC7A11Q9UPY5 501 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.7□□□□□ -1.82
CD44-202ENST00000278385 HEY1Q9Y5J3 304 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 CACNA1AO00555 2505 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 ASCC3Q8N3C0 2202 aaKnown RBP3.7□□□□□ -1.82
CD44-202ENST00000278385 PCNX2A6NKB5 2137 aa3.7□□□□□ -1.82
CD44-202ENST00000278385 VPS13AQ96RL7 3174 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 LOC100131303A0A0U1RQF7 123 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 A6NDN8 102 aa3.69□□□□□ -1.82
CD44-202ENST00000278385 ANKRD65E5RJM6 399 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms