RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 HS3ST3B1Q9Y662 390 aa11.19□□□□□ -0.62
C9orf3-201ENST00000277198 IGHV3-15A0A0B4J1V0 119 aa11.18□□□□□ -0.62
C9orf3-201ENST00000277198 OR6C6A6NF89 314 aa11.18□□□□□ -0.62
C9orf3-201ENST00000277198 SEC11BP0C7V7 166 aa11.18□□□□□ -0.62
C9orf3-201ENST00000277198 ZNF728P0DKX0 622 aa11.18□□□□□ -0.62
C9orf3-201ENST00000277198 ACKR3P25106 362 aa11.18□□□□□ -0.62
C9orf3-201ENST00000277198 LPAR6P43657 344 aa11.18□□□□□ -0.62
C9orf3-201ENST00000277198 PIGPP57054 158 aa11.18□□□□□ -0.62
C9orf3-201ENST00000277198 PCBD1P61457 104 aa11.18□□□□□ -0.62
C9orf3-201ENST00000277198 TMEM88Q6PEY1 159 aa11.18□□□□□ -0.62
C9orf3-201ENST00000277198 FBXL17Q9UF56 701 aa11.18□□□□□ -0.62
C9orf3-201ENST00000277198 AK3Q9UIJ7 227 aa11.18□□□□□ -0.62
C9orf3-201ENST00000277198 AMDHD2Q9Y303 409 aa11.18□□□□□ -0.62
C9orf3-201ENST00000277198 PTRH2Q9Y3E5 179 aaKnown RBP11.18□□□□□ -0.62
C9orf3-201ENST00000277198 RELNP78509 3460 aa11.18□□□□□ -0.62
C9orf3-201ENST00000277198 BAHCC1Q9P281 2608 aa11.18□□□□□ -0.62
C9orf3-201ENST00000277198 ZNF850A8MQ14 1090 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 H7C1Q1 480 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 TNFSF11O14788 317 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 IGHEP01854 428 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 RAB5CP51148 216 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 FUT6P51993 359 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 TMEM187Q14656 261 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 TAF9Q16594 264 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 ABCA11PQ4W5N1 156 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 FAM76BQ5HYJ3 339 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 RTN4IP1Q8WWV3 396 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-201ENST00000277198 CYYR1Q96J86 154 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 FAAP24Q9BTP7 215 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 TIMM10BQ9Y5J6 103 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 NSG1A0A0A6YYJ2 146 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 BORCS7-ASMTA0A0B4J1R7 106 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 ARGFXA6NJG6 315 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 NRASP01111 189 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 CELA2AP08217 269 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 OTX2P32243 289 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 UCP2P55851 309 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 IL13RA2Q14627 380 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 SWI5Q1ZZU3 235 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 NRN1LQ496H8 165 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 DMRTC1Q5HYR2 192 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 OR2A2Q6IF42 318 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 OSR2Q8N2R0 312 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 MRPL24Q96A35 216 aaKnown RBP11.17□□□□□ -0.62
C9orf3-201ENST00000277198 ABHD17AQ96GS6 310 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 SRXN1Q9BYN0 137 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 ZNF286AQ9HBT8 521 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 SLC7A11Q9UPY5 501 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 MRPS18CQ9Y3D5 142 aaKnown RBP11.17□□□□□ -0.62
C9orf3-201ENST00000277198 KPTNQ9Y664 436 aa11.17□□□□□ -0.62
C9orf3-201ENST00000277198 FAM230AA0A1W2PPH8 454 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 PRSS44E7EML9 344 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 MSTNO14793 375 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 LCATP04180 440 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 SFTA3P0C7M3 94 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 P2RY1P47900 373 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 NPBWR1P48145 328 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 RAB13P51153 203 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 CARD18P57730 90 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 B3GALT5-AS1P59052 145 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 TMEM211Q6ICI0 200 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 LIAT1Q6ZQX7 453 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 CBLN2Q8IUK8 224 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 LGI3Q8N145 548 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 CCDC71LQ8N9Z2 235 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 DMBX1Q8NFW5 382 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 MOB3AQ96BX8 217 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 ZNF837Q96EG3 531 aaPredicted RBP11.16□□□□□ -0.62
C9orf3-201ENST00000277198 C18orf12Q96KH6 178 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 JSRP1Q96MG2 331 aaPredicted RBP11.16□□□□□ -0.62
C9orf3-201ENST00000277198 SULT4A1Q9BR01 284 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 HDHD3Q9BSH5 251 aaPredicted RBP11.16□□□□□ -0.62
C9orf3-201ENST00000277198 CRLF2Q9HC73 371 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 BIN3Q9NQY0 253 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 PLSCR2Q9NRY7 297 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 STARD10Q9Y365 291 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 TENM4Q6N022 2769 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 IGKV1-27A0A075B6S5 117 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM90A10PA6NDY2 464 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM90A18PA6NE21 464 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM90A16PA6NEW6 464 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM90A20PA6NIJ5 464 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM90A8PA6NJQ4 464 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM90A7PA6NKC0 464 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 ZNF716A6NP11 495 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM90A22PA8MWA6 464 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM90A12PA8MX19 464 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM90A5PA8MXJ8 464 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM90A23PA8MXZ1 464 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM157AC9JC47 383 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 GPR137BO60478 399 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 GLAP06280 429 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM90A15PP0C7V4 464 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM90A13PP0C7W8 464 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM90A14PP0C7W9 464 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FAM90A24PP0C7X0 464 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 FOLR2P14207 255 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 NME2P22392 152 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 DUSP1P28562 367 aa11.16□□□□□ -0.62
C9orf3-201ENST00000277198 SRPXP78539 464 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms