RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 BOD1Q96IK1 185 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 YPEL4Q96NS1 127 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 NIPSNAP3BQ9BS92 247 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 HSF4Q9ULV5 492 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 UBE2J1Q9Y385 318 aaPredicted RBP11.22□□□□□ -0.61
COL8A1-202ENST00000273342 ADAMTS9Q9P2N4 1935 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 A0A087X0M5 115 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 A0A1B0GX30 115 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 PGA5P0DJD9 388 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 AADACP22760 399 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 DYNLT3P51808 116 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 FGF8P55075 233 aaPredicted RBP11.22□□□□□ -0.61
COL8A1-202ENST00000273342 CFHR1Q03591 330 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 MPV17LQ2QL34 196 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 GPR157Q5UAW9 335 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 LGI3Q8N145 548 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 ABHD5Q8WTS1 349 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 Q96M66 194 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 ZNF385AQ96PM9 386 aaKnown RBP11.22□□□□□ -0.61
COL8A1-202ENST00000273342 GLRX2Q9NS18 164 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 FGF21Q9NSA1 209 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 ARHGAP21Q5T5U3 1957 aa11.21□□□□□ -0.61
COL8A1-202ENST00000273342 IGKV1-27A0A075B6S5 117 aa11.21□□□□□ -0.61
COL8A1-202ENST00000273342 M0R135 149 aa11.21□□□□□ -0.61
COL8A1-202ENST00000273342 SCAF4O95104 1147 aaKnown RBP11.21□□□□□ -0.61
COL8A1-202ENST00000273342 NKX2-1P43699 371 aaPredicted RBP11.21□□□□□ -0.61
COL8A1-202ENST00000273342 HERV-K104P61576 105 aa11.21□□□□□ -0.61
COL8A1-202ENST00000273342 VAMP2P63027 116 aa11.21□□□□□ -0.61
COL8A1-202ENST00000273342 RSPO1Q2MKA7 263 aaPredicted RBP11.21□□□□□ -0.61
COL8A1-202ENST00000273342 HIKESHIQ53FT3 197 aa11.21□□□□□ -0.61
COL8A1-202ENST00000273342 SLC25A24Q6NUK1 477 aa11.21□□□□□ -0.61
COL8A1-202ENST00000273342 MYPOPQ86VE0 399 aaPredicted RBP11.21□□□□□ -0.61
COL8A1-202ENST00000273342 NECAP1Q8NC96 275 aa11.21□□□□□ -0.61
COL8A1-202ENST00000273342 GALNT14Q96FL9 552 aa11.21□□□□□ -0.61
COL8A1-202ENST00000273342 ZNF799Q96GE5 643 aa11.21□□□□□ -0.61
COL8A1-202ENST00000273342 SSX3Q99909 188 aa11.21□□□□□ -0.61
COL8A1-202ENST00000273342 ZNF442Q9H7R0 627 aa11.21□□□□□ -0.61
COL8A1-202ENST00000273342 MAP1BP46821 2468 aaKnown RBP11.21□□□□□ -0.61
COL8A1-202ENST00000273342 A0A1W2PPC4 97 aa11.21□□□□□ -0.62
COL8A1-202ENST00000273342 TUBG1P23258 451 aa11.21□□□□□ -0.62
COL8A1-202ENST00000273342 LSM6P62312 80 aaKnown RBP11.21□□□□□ -0.62
COL8A1-202ENST00000273342 LCN15Q6UWW0 184 aa11.21□□□□□ -0.62
COL8A1-202ENST00000273342 OR10AD1Q8NGE0 317 aa11.21□□□□□ -0.62
COL8A1-202ENST00000273342 CA5BP1Q8WTZ4 195 aa11.21□□□□□ -0.62
COL8A1-202ENST00000273342 OIT3Q8WWZ8 545 aa11.21□□□□□ -0.62
COL8A1-202ENST00000273342 UCN2Q96RP3 112 aa11.21□□□□□ -0.62
COL8A1-202ENST00000273342 C3orf80F5H4A9 247 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 ADAM20O43506 726 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 OR7C1O76099 320 aaPredicted RBP11.2□□□□□ -0.62
COL8A1-202ENST00000273342 HIST1H1BP16401 226 aaKnown RBP11.2□□□□□ -0.62
COL8A1-202ENST00000273342 ICAM4Q14773 271 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 PLPPR5Q32ZL2 321 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 AKR1C8PQ5T2L2 129 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 HIST3H2BBQ8N257 126 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 C18orf12Q96KH6 178 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 METTL9Q9H1A3 318 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 CA14Q9ULX7 337 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 COL4A2P08572 1712 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 A0A1W2PR80 420 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 OR5H1A6NKK0 313 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 SEC14L6B5MCN3 397 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 PROB1E7EW31 1015 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 SNRPCP09234 159 aaKnown RBP11.2□□□□□ -0.62
COL8A1-202ENST00000273342 GRB2P62993 217 aaKnown RBP11.2□□□□□ -0.62
COL8A1-202ENST00000273342 CYB5R2Q6BCY4 276 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 C1QL4Q86Z23 238 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 ZNF695Q8IW36 515 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 CMTM1Q8IZ96 169 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 PLPP5Q8NEB5 264 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 TVP23CQ96ET8 276 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 ST3GAL6Q9Y274 331 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 CACNA1EQ15878 2313 aa11.2□□□□□ -0.62
COL8A1-202ENST00000273342 BTBD17A6NE02 478 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 TMEM50AO95807 157 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 LCATP04180 440 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 FUT3P21217 361 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 DDTP30046 118 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 GNRHRP30968 328 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 RBP2P50120 134 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 IL13RA2Q14627 380 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 WDR25Q64LD2 544 aaPredicted RBP11.19□□□□□ -0.62
COL8A1-202ENST00000273342 THNSL2Q86YJ6 484 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 TMEM252Q8N6L7 170 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 LFNGQ8NES3 379 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 FAM210BQ96KR6 192 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 PACRGQ96M98 296 aaPredicted RBP11.19□□□□□ -0.62
COL8A1-202ENST00000273342 OPA3Q9H6K4 179 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 FOXD3Q9UJU5 478 aaPredicted RBP11.19□□□□□ -0.62
COL8A1-202ENST00000273342 AHCTF1Q8WYP5 2266 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 LRP4O75096 1905 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 A0A087WZY1 265 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 C3orf85A0A1B0GTC6 90 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 A0A1B0GX78 115 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 ZNF705GA8MUZ8 300 aaPredicted RBP11.19□□□□□ -0.62
COL8A1-202ENST00000273342 TERTO14746 1132 aaKnown RBP11.19□□□□□ -0.62
COL8A1-202ENST00000273342 CCL1P22362 96 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 SUCLG1P53597 346 aaKnown RBP11.19□□□□□ -0.62
COL8A1-202ENST00000273342 RPS18P62269 152 aaKnown RBP11.19□□□□□ -0.62
COL8A1-202ENST00000273342 ESPL1Q14674 2120 aa11.19□□□□□ -0.62
COL8A1-202ENST00000273342 SYT3Q9BQG1 590 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms