RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 CA6P23280 308 aa20.81■□□□□ 0.92
SSBP4-201ENST00000270061 GNG2P59768 71 aa20.81■□□□□ 0.92
SSBP4-201ENST00000270061 MKXQ8IYA7 352 aa20.81■□□□□ 0.92
SSBP4-201ENST00000270061 NUDCD2Q8WVJ2 157 aa20.81■□□□□ 0.92
SSBP4-201ENST00000270061 ST8SIA4Q92187 359 aa20.81■□□□□ 0.92
SSBP4-201ENST00000270061 HSF4Q9ULV5 492 aa20.81■□□□□ 0.92
SSBP4-201ENST00000270061 HIVEP2P31629 2446 aa20.81■□□□□ 0.92
SSBP4-201ENST00000270061 B9A039 149 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 DHFRP00374 187 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 CD3DP04234 171 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 SFTPBP07988 381 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 TRAPPC2P0DI81 140 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 TRAPPC2BP0DI82 140 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 KITLGP21583 273 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 C11orf91Q3C1V1 193 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 MBNL2Q5VZF2 373 aaKnown RBP20.8■□□□□ 0.92
SSBP4-201ENST00000270061 Q71RC1 249 aaPredicted RBP20.8■□□□□ 0.92
SSBP4-201ENST00000270061 OR56B4Q8NH76 319 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 MCUBQ9NWR8 336 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 CBX5P45973 191 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 ZNF718Q3SXZ3 478 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 FAM76BQ5HYJ3 339 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 RTN4RL2Q86UN3 420 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 OCSTAMPQ9BR26 566 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 PKIBQ9C010 78 aa20.8■□□□□ 0.92
SSBP4-201ENST00000270061 ZNF736B4DX44 427 aaPredicted RBP20.79■□□□□ 0.92
SSBP4-201ENST00000270061 RNF223E7ERA6 249 aa20.79■□□□□ 0.92
SSBP4-201ENST00000270061 LY6G6DO95868 133 aa20.79■□□□□ 0.92
SSBP4-201ENST00000270061 HEXAP06865 529 aa20.79■□□□□ 0.92
SSBP4-201ENST00000270061 H2AFB2P0C5Z0 115 aa20.79■□□□□ 0.92
SSBP4-201ENST00000270061 NAT1P18440 290 aa20.79■□□□□ 0.92
SSBP4-201ENST00000270061 MPV17P39210 176 aa20.79■□□□□ 0.92
SSBP4-201ENST00000270061 EFNB3Q15768 340 aa20.79■□□□□ 0.92
SSBP4-201ENST00000270061 CARTPTQ16568 116 aa20.79■□□□□ 0.92
SSBP4-201ENST00000270061 DVL3Q92997 716 aaPredicted RBP20.79■□□□□ 0.92
SSBP4-201ENST00000270061 MICU1Q9BPX6 476 aa20.79■□□□□ 0.92
SSBP4-201ENST00000270061 RTL8AQ9BWD3 113 aa20.79■□□□□ 0.92
SSBP4-201ENST00000270061 OR51I2Q9H344 312 aa20.79■□□□□ 0.92
SSBP4-201ENST00000270061 PURGQ9UJV8 347 aaKnown RBP20.79■□□□□ 0.92
SSBP4-201ENST00000270061 SPEF1Q9Y4P9 236 aa20.79■□□□□ 0.92
SSBP4-201ENST00000270061 HMX3A6NHT5 357 aa20.78■□□□□ 0.92
SSBP4-201ENST00000270061 MPZP25189 248 aa20.78■□□□□ 0.92
SSBP4-201ENST00000270061 NHLRC3Q5JS37 347 aa20.78■□□□□ 0.92
SSBP4-201ENST00000270061 SIGIRRQ6IA17 410 aa20.78■□□□□ 0.92
SSBP4-201ENST00000270061 FAAP20Q6NZ36 180 aa20.78■□□□□ 0.92
SSBP4-201ENST00000270061 OR4D10Q8NGI6 311 aa20.78■□□□□ 0.92
SSBP4-201ENST00000270061 REG4Q9BYZ8 158 aa20.78■□□□□ 0.92
SSBP4-201ENST00000270061 IFT46Q9NQC8 304 aa20.78■□□□□ 0.92
SSBP4-201ENST00000270061 ALG5Q9Y673 324 aa20.78■□□□□ 0.92
SSBP4-201ENST00000270061 TRAV6A0A075B6T7 132 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 FAM90A10PA6NDY2 464 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 FAM90A18PA6NE21 464 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 FAM90A16PA6NEW6 464 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 FAM90A20PA6NIJ5 464 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 FAM90A8PA6NJQ4 464 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 FAM90A7PA6NKC0 464 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 FAM90A22PA8MWA6 464 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 FAM90A12PA8MX19 464 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 FAM90A5PA8MXJ8 464 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 FAM90A23PA8MXZ1 464 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 NDUFB6O95139 128 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 RAB3DO95716 219 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 HNRNPCP07910 306 aaKnown RBP eCLIP20.77■□□□□ 0.92
SSBP4-201ENST00000270061 FAM90A15PP0C7V4 464 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 FAM90A13PP0C7W8 464 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 FAM90A14PP0C7W9 464 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 FAM90A24PP0C7X0 464 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 TBPP20226 339 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 GABRR1P24046 479 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 EFNA4P52798 201 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 IL24Q13007 206 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 CLEC2AQ6UVW9 174 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 ZNF782Q6ZMW2 699 aaPredicted RBP20.77■□□□□ 0.92
SSBP4-201ENST00000270061 OR8G5Q8NG78 346 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 OR8S1Q8NH09 359 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 C20orf85Q9H1P6 137 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 PLK3Q9H4B4 646 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 ST3GAL6Q9Y274 331 aa20.77■□□□□ 0.92
SSBP4-201ENST00000270061 NPBWR2P48146 333 aa20.77■□□□□ 0.91
SSBP4-201ENST00000270061 RBM11P57052 281 aaKnown RBP20.77■□□□□ 0.91
SSBP4-201ENST00000270061 MEF2DQ14814 521 aa20.77■□□□□ 0.91
SSBP4-201ENST00000270061 TAF9Q16594 264 aa20.77■□□□□ 0.91
SSBP4-201ENST00000270061 ALKBH6Q3KRA9 238 aa20.77■□□□□ 0.91
SSBP4-201ENST00000270061 AKAP14Q86UN6 197 aa20.77■□□□□ 0.91
SSBP4-201ENST00000270061 VRK1Q99986 396 aaPredicted RBP20.77■□□□□ 0.91
SSBP4-201ENST00000270061 RHOFQ9HBH0 211 aa20.77■□□□□ 0.91
SSBP4-201ENST00000270061 PLEKHJ1Q9NW61 149 aa20.77■□□□□ 0.91
SSBP4-201ENST00000270061 MTCH1Q9NZJ7 389 aa20.77■□□□□ 0.91
SSBP4-201ENST00000270061 FBXO9Q9UK97 447 aaPredicted RBP20.77■□□□□ 0.91
SSBP4-201ENST00000270061 C7orf66A4D0T2 115 aa20.76■□□□□ 0.91
SSBP4-201ENST00000270061 DSCR9P59020 149 aa20.76■□□□□ 0.91
SSBP4-201ENST00000270061 FGF12P61328 243 aa20.76■□□□□ 0.91
SSBP4-201ENST00000270061 ARFRP1Q13795 201 aa20.76■□□□□ 0.91
SSBP4-201ENST00000270061 ZNF525Q8N782 197 aa20.76■□□□□ 0.91
SSBP4-201ENST00000270061 GVQW1Q8N7I0 195 aa20.76■□□□□ 0.91
SSBP4-201ENST00000270061 TMEM100Q9NV29 134 aa20.76■□□□□ 0.91
SSBP4-201ENST00000270061 FN1P02751 2386 aaKnown RBP20.76■□□□□ 0.91
SSBP4-201ENST00000270061 LRP5LA4QPB2 252 aa20.75■□□□□ 0.91
SSBP4-201ENST00000270061 TRAPPC2LH3BP13 241 aa20.75■□□□□ 0.91
SSBP4-201ENST00000270061 GEMIN2O14893 280 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms