RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 CADP27708 2225 aa13.44□□□□□ -0.26
VPS26A-201ENST00000263559 C9orf170A2RU37 121 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 HSPB6O14558 160 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 GIPP09681 153 aaPredicted RBP13.43□□□□□ -0.26
VPS26A-201ENST00000263559 DNASE1P24855 282 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 FPR2P25090 351 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 H2BFSP57053 126 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 RBPJQ06330 500 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 MSMPQ1L6U9 139 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 C3orf36Q3SXR2 165 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 FAHD2BQ6P2I3 314 aaPredicted RBP13.43□□□□□ -0.26
VPS26A-201ENST00000263559 PEG10Q86TG7 708 aaKnown RBP13.43□□□□□ -0.26
VPS26A-201ENST00000263559 FAHD2AQ96GK7 314 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 MSL2Q9HCI7 577 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 MGAT4AQ9UM21 535 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 SLC22A5O76082 557 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 CRYAAP02489 173 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 CCKARP32238 428 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 ERVK11-1P61568 191 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 RGS7BPQ6MZT1 257 aaPredicted RBP13.43□□□□□ -0.26
VPS26A-201ENST00000263559 SLC22A25Q6T423 547 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 LINC00596Q86U02 117 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 RELL2Q8NC24 303 aaPredicted RBP13.43□□□□□ -0.26
VPS26A-201ENST00000263559 ZNF2Q9BSG1 426 aaPredicted RBP13.43□□□□□ -0.26
VPS26A-201ENST00000263559 POLDIP2Q9Y2S7 368 aa13.43□□□□□ -0.26
VPS26A-201ENST00000263559 PCNX1Q96RV3 2341 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 TMEM210A6NLX4 147 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 F5H5P2 479 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 TPD52L2O43399 206 aaKnown RBP13.42□□□□□ -0.26
VPS26A-201ENST00000263559 OR5H8P0DN80 308 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 PI3P19957 117 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 IL13RA1P78552 427 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 IL13RA2Q14627 380 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 DCAF12L2Q5VW00 463 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 SUMF2Q8NBJ7 301 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 TMEM246Q9BRR3 403 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 RTBDNQ9BSG5 229 aaPredicted RBP13.42□□□□□ -0.26
VPS26A-201ENST00000263559 LIME1Q9H400 295 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 ZNF286AQ9HBT8 521 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 NECAP2Q9NVZ3 263 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.42□□□□□ -0.26
VPS26A-201ENST00000263559 MCRIP1C9JLW8 97 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 HS3ST1O14792 307 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 VAMP1P23763 118 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 ZNF660Q6AZW8 331 aaPredicted RBP13.42□□□□□ -0.26
VPS26A-201ENST00000263559 LRP11Q86VZ4 500 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 TMEM230Q96A57 120 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 RHOFQ9HBH0 211 aa13.42□□□□□ -0.26
VPS26A-201ENST00000263559 CHMP1AQ9HD42 196 aaPredicted RBP13.42□□□□□ -0.26
VPS26A-201ENST00000263559 ZNF205O95201 554 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 PGA5P0DJD9 388 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 CD34P28906 385 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 GMFBP60983 142 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 SNRPD2P62316 118 aaKnown RBP13.41□□□□□ -0.26
VPS26A-201ENST00000263559 C11orf88Q6PI97 169 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 C11orf53Q8IXP5 236 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 C9orf62Q8N4C0 152 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 TMEM185AQ8NFB2 350 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 GRPEL2Q8TAA5 225 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 NEK7Q8TDX7 302 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 SCGB3A2Q96PL1 93 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 NRIP2Q9BQI9 281 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 TMPRSS13Q9BYE2 586 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 WDR13Q9H1Z4 485 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 CXXC4Q9H2H0 198 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 ELOVL5Q9NYP7 299 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 JKAMPQ9P055 326 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 DUSP13Q9UII6 198 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 PAIP2BQ9ULR5 123 aaKnown RBP13.41□□□□□ -0.26
VPS26A-201ENST00000263559 TRAV24A0A0B4J272 114 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 NAPSAO96009 420 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 GSTT2P0CG29 244 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 GLRA1P23415 457 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 ID4P47928 161 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 TAS2R31P59538 309 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 RAP2BP61225 183 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 DHODHQ02127 395 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 TMEM128Q5BJH2 165 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 Q8IYB0 196 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 RDH5Q92781 318 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 SPACA1Q9HBV2 294 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 HSPB11Q9Y547 144 aa13.41□□□□□ -0.26
VPS26A-201ENST00000263559 C16orf97H3BN30 126 aa13.4□□□□□ -0.26
VPS26A-201ENST00000263559 NKX6-1P78426 367 aaPredicted RBP13.4□□□□□ -0.26
VPS26A-201ENST00000263559 KLRB1Q12918 225 aa13.4□□□□□ -0.26
VPS26A-201ENST00000263559 LIN54Q6MZP7 749 aa13.4□□□□□ -0.26
VPS26A-201ENST00000263559 Q6P435 159 aa13.4□□□□□ -0.26
VPS26A-201ENST00000263559 DHRS11Q6UWP2 260 aa13.4□□□□□ -0.26
VPS26A-201ENST00000263559 ZNF826PQ6ZT77 177 aa13.4□□□□□ -0.26
VPS26A-201ENST00000263559 CASTOR1Q8WTX7 329 aa13.4□□□□□ -0.26
VPS26A-201ENST00000263559 MITD1Q8WV92 249 aa13.4□□□□□ -0.26
VPS26A-201ENST00000263559 SPEF1Q9Y4P9 236 aa13.4□□□□□ -0.26
VPS26A-201ENST00000263559 LY6G6FQ5SQ64 297 aa13.4□□□□□ -0.26
VPS26A-201ENST00000263559 PRAMEF6Q5VXH4 476 aa13.4□□□□□ -0.26
VPS26A-201ENST00000263559 OPN4Q9UHM6 478 aa13.4□□□□□ -0.26
VPS26A-201ENST00000263559 ZZEF1O43149 2961 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 ATP6V1G2-DDX39BF2Z307 99 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 DEGS1O15121 323 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 ZNF44P15621 663 aa13.39□□□□□ -0.27
VPS26A-201ENST00000263559 ZNF250P15622 560 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms