RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 STARD10Q9Y365 291 aa9.49□□□□□ -0.89
CD44-201ENST00000263398 NDUFB3O43676 98 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 CST2P09228 141 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 LIMS1P48059 325 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 TPPP2P59282 170 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 NANOS3P60323 173 aaKnown RBP9.48□□□□□ -0.89
CD44-201ENST00000263398 SUMO1P63165 101 aaKnown RBP9.48□□□□□ -0.89
CD44-201ENST00000263398 Q3ZCU0 254 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 LRRC10Q5BKY1 277 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 STUMQ69YW2 141 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 OR10D4PQ8NGN7 298 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 OR6S1Q8NH40 331 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 FAM210BQ96KR6 192 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 ZMIZ1Q9ULJ6 1067 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 DTX4Q9Y2E6 619 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 DSPPQ9NZW4 1301 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 OR3A1P47881 315 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 RAB7AP51149 207 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 FAM3AP98173 230 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 PNRC1Q12796 327 aaPredicted RBP9.48□□□□□ -0.89
CD44-201ENST00000263398 LYG1Q8N1E2 194 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 GHITMQ9H3K2 345 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 IGKV1-8A0A0C4DH67 115 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 A0A1W2PQF6 199 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 RBFOX3A6NFN3 312 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 SYNGR2O43760 224 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 PRSS12P56730 875 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 RANP62826 216 aaKnown RBP9.48□□□□□ -0.89
CD44-201ENST00000263398 HLA-DRB3P79483 266 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 IER2Q9BTL4 223 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 TRAPPC1Q9Y5R8 145 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 PLXNB2O15031 1838 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 CEP250Q9BV73 2442 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 SEC14L6B5MCN3 397 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 CDS2O95674 445 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 PPYP01298 95 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 TMIGD3P0DMS9 266 aaPredicted RBP9.48□□□□□ -0.89
CD44-201ENST00000263398 CCL2P13500 99 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 FABP4P15090 132 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 CDC34P49427 236 aaPredicted RBP9.48□□□□□ -0.89
CD44-201ENST00000263398 COL13A1Q5TAT6 717 aaPredicted RBP9.48□□□□□ -0.89
CD44-201ENST00000263398 TSPO2Q5TGU0 170 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 NEIL1Q96FI4 390 aaPredicted RBP9.48□□□□□ -0.89
CD44-201ENST00000263398 TMEM147Q9BVK8 224 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 OR2D2Q9H210 308 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 SLC45A2Q9UMX9 530 aa9.48□□□□□ -0.89
CD44-201ENST00000263398 ZNF318Q5VUA4 2279 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 A0A1W2PR80 420 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 MED19A0JLT2 244 aaPredicted RBP9.47□□□□□ -0.89
CD44-201ENST00000263398 TRDCB7Z8K6 153 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 DNPH1O43598 174 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 ZNF737O75373 536 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 EFNB2P52799 333 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 KRTDAPP60985 99 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 ALKBH6Q3KRA9 238 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 CD200R1LQ6Q8B3 271 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 TBC1D26Q86UD7 250 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 C9orf40Q8IXQ3 194 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 TM4SF19Q96DZ7 209 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 SLC2A9Q9NRM0 540 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 TRGV8A0A0C4DH27 118 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 GEMIN2O14893 280 aaKnown RBP9.47□□□□□ -0.89
CD44-201ENST00000263398 GREM1O60565 184 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 LRFN3Q9BTN0 628 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 SEC11CQ9BY50 192 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 CHST5Q9GZS9 411 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 ESRP2Q9H6T0 727 aaKnown RBP9.47□□□□□ -0.89
CD44-201ENST00000263398 BARX1Q9HBU1 254 aaPredicted RBP9.47□□□□□ -0.89
CD44-201ENST00000263398 ELF5Q9UKW6 265 aaPredicted RBP9.47□□□□□ -0.89
CD44-201ENST00000263398 FGF2P09038 288 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 F2RP25116 425 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 RPS4XP62701 263 aaKnown RBP9.47□□□□□ -0.89
CD44-201ENST00000263398 PAX5Q02548 391 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 MESP2Q0VG99 397 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 SP7Q8TDD2 431 aaPredicted RBP9.47□□□□□ -0.89
CD44-201ENST00000263398 FBXO17Q96EF6 278 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 TRAF4Q9BUZ4 470 aaPredicted RBP9.47□□□□□ -0.89
CD44-201ENST00000263398 RNF24Q9Y225 148 aa9.47□□□□□ -0.89
CD44-201ENST00000263398 DEFB108AA8MXU0 73 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 IGF2P01344 180 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 MBPP02686 304 aaPredicted RBP9.46□□□□□ -0.89
CD44-201ENST00000263398 GALR1P47211 349 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 ZNF83P51522 516 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 RHOBP62745 196 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 C19orf57Q0VDD7 668 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 ZNF345Q14585 488 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 IQCJQ1A5X6 159 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 MPV17LQ2QL34 196 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 TMEM211Q6ICI0 200 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 OR10G4Q8NGN3 311 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 OR10G9Q8NGN4 311 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 OR10G7Q8NGN6 311 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 ZPLD1Q8TCW7 415 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 LRRC29Q8WV35 223 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 ZNRF4Q8WWF5 429 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 MRPL24Q96A35 216 aaKnown RBP9.46□□□□□ -0.89
CD44-201ENST00000263398 SLC25A22Q9H936 323 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 PRR13Q9NZ81 148 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 TRIOBPQ9H2D6 2365 aa9.46□□□□□ -0.89
CD44-201ENST00000263398 LYZL6O75951 148 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms