RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 SOCS1O15524 211 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 RGS5O15539 181 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 CPT2P23786 658 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 NR4A2P43354 598 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 ART1P52961 327 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 UBE2NLQ5JXB2 153 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 FAM216BQ8N7L0 139 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 GAFA1Q96PS6 74 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 URM1Q9BTM9 101 aaKnown RBP20.32■□□□□ 0.84
SCN1B-201ENST00000262631 ATG5Q9H1Y0 275 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 MAB21L2Q9Y586 359 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 SH2D1BO14796 132 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 TMPRSS2O15393 492 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 ZNF44P15621 663 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 DSCR9P59020 149 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 COL10A1Q03692 680 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 TMEM155Q4W5P6 130 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 ATPAF1Q5TC12 328 aaPredicted RBP20.32■□□□□ 0.84
SCN1B-201ENST00000262631 BRICD5Q6PL45 260 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 ZNF788Q6ZQV5 615 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 DCDC5Q6ZRR9 648 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 MUC20Q8N307 709 aaPredicted RBP20.32■□□□□ 0.84
SCN1B-201ENST00000262631 DTX3Q8N9I9 347 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 ZNRF1Q8ND25 227 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 ABCG5Q9H222 651 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 CTSZQ9UBR2 303 aa20.32■□□□□ 0.84
SCN1B-201ENST00000262631 SETXQ7Z333 2677 aaKnown RBP20.31■□□□□ 0.84
SCN1B-201ENST00000262631 TRAV24A0A0B4J272 114 aa20.31■□□□□ 0.84
SCN1B-201ENST00000262631 FOXI3A8MTJ6 420 aaPredicted RBP20.31■□□□□ 0.84
SCN1B-201ENST00000262631 RAB27BO00194 218 aa20.31■□□□□ 0.84
SCN1B-201ENST00000262631 DEGS1O15121 323 aa20.31■□□□□ 0.84
SCN1B-201ENST00000262631 PSPNO60542 156 aa20.31■□□□□ 0.84
SCN1B-201ENST00000262631 FCN3O75636 299 aa20.31■□□□□ 0.84
SCN1B-201ENST00000262631 ELK1P19419 428 aa20.31■□□□□ 0.84
SCN1B-201ENST00000262631 KCNJ8Q15842 424 aa20.31■□□□□ 0.84
SCN1B-201ENST00000262631 MPV17LQ2QL34 196 aa20.31■□□□□ 0.84
SCN1B-201ENST00000262631 PRSS57Q6UWY2 283 aa20.31■□□□□ 0.84
SCN1B-201ENST00000262631 LINC00596Q86U02 117 aa20.31■□□□□ 0.84
SCN1B-201ENST00000262631 SDSLQ96GA7 329 aa20.31■□□□□ 0.84
SCN1B-201ENST00000262631 FOXC2Q99958 501 aa20.31■□□□□ 0.84
SCN1B-201ENST00000262631 SLC33A1O00400 549 aaPredicted RBP20.3■□□□□ 0.84
SCN1B-201ENST00000262631 HSPB6O14558 160 aa20.3■□□□□ 0.84
SCN1B-201ENST00000262631 ADAM20O43506 726 aa20.3■□□□□ 0.84
SCN1B-201ENST00000262631 PITPNBP48739 271 aa20.3■□□□□ 0.84
SCN1B-201ENST00000262631 TMEM50BP56557 158 aa20.3■□□□□ 0.84
SCN1B-201ENST00000262631 C17orf107Q6ZR85 190 aa20.3■□□□□ 0.84
SCN1B-201ENST00000262631 MMP27Q9H306 513 aa20.3■□□□□ 0.84
SCN1B-201ENST00000262631 GLS2Q9UI32 602 aa20.3■□□□□ 0.84
SCN1B-201ENST00000262631 IGHV4-61A0A0C4DH41 118 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 TMEM82A0PJX8 343 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 ZNF737O75373 536 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 BLVRBP30043 206 aaPredicted RBP20.29■□□□□ 0.84
SCN1B-201ENST00000262631 PLAC9Q5JTB6 97 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FGFRL1Q8N441 504 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 CHST6Q9GZX3 395 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 ZNF665Q9H7R5 613 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 IFT22Q9H7X7 185 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 SEBOXQ9HB31 216 aaPredicted RBP20.29■□□□□ 0.84
SCN1B-201ENST00000262631 RCC2Q9P258 522 aaKnown RBP20.29■□□□□ 0.84
SCN1B-201ENST00000262631 A3GALT2U3KPV4 340 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 METTL21EPA6NDL7 271 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FAM90A10PA6NDY2 464 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FAM90A18PA6NE21 464 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FAM90A16PA6NEW6 464 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FAM90A20PA6NIJ5 464 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FAM90A8PA6NJQ4 464 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FAM90A7PA6NKC0 464 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FAM90A22PA8MWA6 464 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FAM90A12PA8MX19 464 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FAM90A5PA8MXJ8 464 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FAM90A23PA8MXZ1 464 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 SIGLEC5O15389 551 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 NDUFA2O43678 99 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 APOA1P02647 267 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FAM90A15PP0C7V4 464 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FAM90A13PP0C7W8 464 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FAM90A14PP0C7W9 464 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 FAM90A24PP0C7X0 464 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 LMO1P25800 156 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 ATAD3CQ5T2N8 411 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 C6orf201Q7Z4U5 140 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 BPIFB2Q8N4F0 458 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 SPICQ8N5J4 248 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 ASCC1Q8N9N2 400 aaKnown RBP20.29■□□□□ 0.84
SCN1B-201ENST00000262631 OR56B1Q8NGI3 324 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 Q96MF0 132 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 SHARPINQ9H0F6 387 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 DNTTIP1Q9H147 329 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 KAAG1Q9UBP8 84 aa20.29■□□□□ 0.84
SCN1B-201ENST00000262631 PRRC2AP48634 2157 aaKnown RBP20.28■□□□□ 0.84
SCN1B-201ENST00000262631 CHRM2P08172 466 aa20.28■□□□□ 0.84
SCN1B-201ENST00000262631 CDK2P24941 298 aa20.28■□□□□ 0.84
SCN1B-201ENST00000262631 CHATP28329 748 aa20.28■□□□□ 0.84
SCN1B-201ENST00000262631 IL13RA1P78552 427 aa20.28■□□□□ 0.84
SCN1B-201ENST00000262631 MADCAM1Q13477 382 aa20.28■□□□□ 0.84
SCN1B-201ENST00000262631 NKAPLQ5M9Q1 402 aa20.28■□□□□ 0.84
SCN1B-201ENST00000262631 RAB12Q6IQ22 244 aa20.28■□□□□ 0.84
SCN1B-201ENST00000262631 Q6ZNX1 250 aa20.28■□□□□ 0.84
SCN1B-201ENST00000262631 IZUMO1Q8IYV9 350 aa20.28■□□□□ 0.84
SCN1B-201ENST00000262631 ZNF561Q8N587 486 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms