RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 CRIP3Q6Q6R5 217 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 CCBE1Q6UXH8 406 aaPredicted RBP9.87□□□□□ -0.83
TRAF4-202ENST00000262396 KCTD20Q7Z5Y7 419 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 DNAAF1Q8NEP3 725 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 OR5AU1Q8NGC0 362 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 CREB3L1Q96BA8 519 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 OPALINQ96PE5 141 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 GABARAPL1Q9H0R8 117 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 SERTAD4Q9NUC0 356 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 NECAP2Q9NVZ3 263 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 DPM3Q9P2X0 92 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 UBE2J1Q9Y385 318 aaPredicted RBP9.87□□□□□ -0.83
TRAF4-202ENST00000262396 IGKV1-27A0A075B6S5 117 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 LEUTXA8MZ59 168 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 J3QLW9 94 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 TMEM225BP0DP42 221 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 ZNF19P17023 458 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 CDK2P24941 298 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 NPBWR2P48146 333 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 DYNLT3P51808 116 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 PRRX1P54821 245 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 BLCAPP62952 87 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 ZNF91Q05481 1191 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 PRAMEF5Q5TYX0 476 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 C16orf82Q7Z2V1 217 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 RTN4RL2Q86UN3 420 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 PRSS35Q8N3Z0 413 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 OR4X2Q8NGF9 303 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 OR52N4Q8NGI2 321 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 OR5D18Q8NGL1 313 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 EME1Q96AY2 570 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 SPSB1Q96BD6 273 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 RNFT2Q96EX2 444 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 IL36RNQ9UBH0 155 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 HHLA2Q9UM44 414 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 OAZ3Q9UMX2 235 aa9.86□□□□□ -0.83
TRAF4-202ENST00000262396 FAM172BPA6NC97 362 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 DEGS1O15121 323 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 MAGEB3O15480 346 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 ENTPD6O75354 484 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 CD24P25063 80 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 NFYBP25208 207 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 POLR2IP36954 125 aaKnown RBP9.85□□□□□ -0.83
TRAF4-202ENST00000262396 PTGFRP43088 359 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 LOXL3P58215 753 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 EFNB1P98172 346 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 AESQ08117 197 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 PDZK1IP1Q13113 114 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 TMEM95Q3KNT9 176 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 KRBOX4Q5JUW0 171 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 CCDC144NLQ6NUI1 221 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 Q6ZSR3 168 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 CCDC121Q6ZUS5 278 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 Q8N2B8 174 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 OR13C9Q8NGT0 318 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 OR2G2Q8NGZ5 317 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 TRUB1Q8WWH5 349 aaKnown RBP9.85□□□□□ -0.83
TRAF4-202ENST00000262396 ADAT3Q96EY9 351 aaPredicted RBP9.85□□□□□ -0.83
TRAF4-202ENST00000262396 CENPNQ96H22 339 aaPredicted RBP9.85□□□□□ -0.83
TRAF4-202ENST00000262396 SLC25A33Q9BSK2 321 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 HMG20AQ9NP66 347 aa9.85□□□□□ -0.83
TRAF4-202ENST00000262396 SLC16A6O15403 523 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 PSPNO60542 156 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 OR2H2O95918 312 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 LPLP06858 475 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 JUNBP17275 347 aaPredicted RBP9.84□□□□□ -0.83
TRAF4-202ENST00000262396 ERP29P30040 261 aaKnown RBP9.84□□□□□ -0.83
TRAF4-202ENST00000262396 KIR3DL2P43630 455 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 OR3A4PP47883 348 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 ZNF85Q03923 595 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 ZNF146Q15072 292 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 ABCA11PQ4W5N1 156 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 MEDAGQ5VYS4 303 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 UTS2BQ765I0 119 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 TSEN15Q8WW01 171 aaKnown RBP9.84□□□□□ -0.83
TRAF4-202ENST00000262396 DPF1Q92782 380 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 CPNE2Q96FN4 548 aaPredicted RBP9.84□□□□□ -0.83
TRAF4-202ENST00000262396 HRASLS5Q96KN8 279 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 SPACA5Q96QH8 159 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 NR1H4Q96RI1 486 aaPredicted RBP9.84□□□□□ -0.83
TRAF4-202ENST00000262396 GPER1Q99527 375 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 OSBPL10Q9BXB5 764 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 GABARAPL3Q9BY60 117 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 COMMD4Q9H0A8 199 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 LIN7BQ9HAP6 207 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 TAS2R3Q9NYW6 316 aa9.84□□□□□ -0.83
TRAF4-202ENST00000262396 TSSC4Q9Y5U2 329 aaPredicted RBP9.84□□□□□ -0.83
TRAF4-202ENST00000262396 HSPB6O14558 160 aa9.83□□□□□ -0.84
TRAF4-202ENST00000262396 RPSAP08865 295 aaKnown RBP9.83□□□□□ -0.84
TRAF4-202ENST00000262396 FAM106CPP0CH98 169 aa9.83□□□□□ -0.84
TRAF4-202ENST00000262396 GLP1RP43220 463 aa9.83□□□□□ -0.84
TRAF4-202ENST00000262396 OR3A1P47881 315 aa9.83□□□□□ -0.84
TRAF4-202ENST00000262396 GLIPR1P48060 266 aa9.83□□□□□ -0.84
TRAF4-202ENST00000262396 SLC35A2P78381 396 aa9.83□□□□□ -0.84
TRAF4-202ENST00000262396 HES1Q14469 280 aa9.83□□□□□ -0.84
TRAF4-202ENST00000262396 ATXN7L3Q14CW9 347 aaPredicted RBP9.83□□□□□ -0.84
TRAF4-202ENST00000262396 ZIK1Q3SY52 487 aaPredicted RBP9.83□□□□□ -0.84
TRAF4-202ENST00000262396 DEFB121Q5J5C9 76 aa9.83□□□□□ -0.84
TRAF4-202ENST00000262396 KPRPQ5T749 579 aaPredicted RBP9.83□□□□□ -0.84
TRAF4-202ENST00000262396 HEPN1Q6WQI6 88 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms