RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 NHLH1Q02575 133 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 NHLH2Q02577 135 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 PLAC1Q9HBJ0 212 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 GPR27Q9NS67 375 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 SOCS1O15524 211 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 ADAP1O75689 374 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 HAND1O96004 215 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 POLR2GP62487 172 aaKnown RBP eCLIP10.68□□□□□ -0.7
COL8A1-201ENST00000261037 TGIF2LYQ8IUE0 185 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 SFTPA2Q8IWL1 248 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 NTNG2Q96CW9 530 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 SLC45A2Q9UMX9 530 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 PGA3P0DJD8 388 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 CCL3P10147 92 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 FAM78BQ5VT40 261 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 TRAV39A0A0B4J263 110 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 TRAV34A0A0B4J273 112 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 SPAARA0A1B0GVQ0 90 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 CBY3A6NI87 242 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 ZNF716A6NP11 495 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 PTBP3O95758 552 aaKnown RBP10.68□□□□□ -0.7
COL8A1-201ENST00000261037 S100A8P05109 93 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 HTR1DP28221 377 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 TMEM241Q24JQ0 296 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 RHBDD2Q6NTF9 364 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 BRWD3Q6RI45 1802 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 OR8B3Q8NGG8 313 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 ABHD3Q8WU67 409 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 R3HDM4Q96D70 268 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 NEIL1Q96FI4 390 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-201ENST00000261037 OR8B2Q96RD0 313 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 LPAR2Q9HBW0 351 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 FBXL17Q9UF56 701 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 PCOLCE2Q9UKZ9 415 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 WSB1Q9Y6I7 421 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 A0A1W2PN81 502 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 OR2M5A3KFT3 312 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 SNCGO76070 127 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 MPC2O95563 127 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 OR5AL1P0C617 328 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 FGF9P31371 208 aaPredicted RBP10.67□□□□□ -0.7
COL8A1-201ENST00000261037 CAMPP49913 170 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 MAP6Q96JE9 813 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 WDR13Q9H1Z4 485 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 FKBP11Q9NYL4 201 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 FRRS1LQ9P0K9 344 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 MBD1Q9UIS9 605 aaPredicted RBP10.67□□□□□ -0.7
COL8A1-201ENST00000261037 TINAGQ9UJW2 476 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 IGHV5-10-1A0A0J9YXX1 117 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 CDIPTO14735 213 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 ZNF154Q13106 437 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 JMJD6Q6NYC1 403 aaPredicted RBP10.67□□□□□ -0.7
COL8A1-201ENST00000261037 OR6X1Q8NH79 312 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 UCN2Q96RP3 112 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 RNF2Q99496 336 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 AMDHD2Q9Y303 409 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 STARD10Q9Y365 291 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 LIPT2A6NK58 231 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 ANKRD34CP0C6C1 535 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 PMELP40967 661 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 SKP2Q13309 424 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 CLRN3Q8NCR9 226 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 HMGCLL1Q8TB92 370 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 ZNF831Q5JPB2 1677 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 IGHV3-21A0A0B4J1V1 117 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 ANKRD20A5PA0PJZ0 165 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 FCN1O00602 326 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 TMEM97Q5BJF2 176 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 TUBAL3A6NHL2 446 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 SPINT1O43278 529 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 G6PCP35575 357 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 MRPS11P82912 194 aaKnown RBP10.67□□□□□ -0.7
COL8A1-201ENST00000261037 ZAR1Q86SH2 424 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 OR2C3Q8N628 320 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 OR10D4PQ8NGN7 298 aa10.67□□□□□ -0.7
COL8A1-201ENST00000261037 TAF1LQ8IZX4 1826 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 F2RL2O00254 374 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 CRXO43186 299 aaPredicted RBP10.66□□□□□ -0.7
COL8A1-201ENST00000261037 PIGYQ3MUY2 71 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 FAM24BQ8N5W8 94 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 PRSS3P2Q8NHM4 247 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 GRAMD2BQ96HH9 432 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 RSRP1Q9BUV0 290 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 TOLLIPQ9H0E2 274 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 TRDCB7Z8K6 153 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 CD160O95971 181 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 PNPP00491 289 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 CSN3P07498 182 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 PCMT1P22061 227 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 TCL1AP56279 114 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 TUSC1Q2TAM9 212 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 LIAT1Q6ZQX7 453 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 TIPARPQ7Z3E1 657 aaKnown RBP10.66□□□□□ -0.7
COL8A1-201ENST00000261037 LANCL1O43813 399 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 TMEM127O75204 238 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 PTPMT1Q8WUK0 201 aaPredicted RBP10.66□□□□□ -0.7
COL8A1-201ENST00000261037 FLYWCH2Q96CP2 140 aaKnown RBP10.66□□□□□ -0.7
COL8A1-201ENST00000261037 PRO1933Q9H354 126 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 GP1BAP07359 652 aa10.66□□□□□ -0.7
COL8A1-201ENST00000261037 ATG4DQ86TL0 474 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms