RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ASCL2Q99929 193 aa6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 TPSD1Q9BZJ3 242 aa6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 NXF5Q9H1B4 397 aaKnown RBP6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 SH2D2AQ9NP31 389 aa6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 MYO5AQ9Y4I1 1855 aaKnown RBP6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 SSC5DA1L4H1 1573 aa6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 SBF2Q86WG5 1849 aa6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 OR2M5A3KFT3 312 aa6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 ETHE1O95571 254 aa6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 DUS4LO95620 317 aaKnown RBP6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 CD1CP29017 333 aa6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 HRH1P35367 487 aa6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 SLC35B1P78383 322 aa6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 WDR82Q6UXN9 313 aa6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 KLHDC9Q8NEP7 349 aa6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 FGF20Q9NP95 211 aaPredicted RBP6.01□□□□□ -1.45
PDGFRA-201ENST00000257290 TRAV1-2A0A0B4J238 106 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 A0A1W2PRU2 124 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 J3KT08 172 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 GALR2O43603 387 aaPredicted RBP6□□□□□ -1.45
PDGFRA-201ENST00000257290 ATP5LO75964 103 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 SLC25A14O95258 325 aaPredicted RBP6□□□□□ -1.45
PDGFRA-201ENST00000257290 CRYGCP07315 174 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 CD1DP15813 335 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 ZNF823P16415 610 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 AADACP22760 399 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 ID1P41134 155 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 LPAR6P43657 344 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 SGSHP51688 502 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 LRRC10Q5BKY1 277 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 LYG1Q8N1E2 194 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 PRRG4Q9BZD6 226 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 NRXN2Q9P2S2 1712 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 ANKRD31Q8N7Z5 1873 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 CD5LO43866 347 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 GCM2O75603 506 aaPredicted RBP6□□□□□ -1.45
PDGFRA-201ENST00000257290 TIMP1P01033 207 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 GAPDHP04406 335 aaKnown RBP6□□□□□ -1.45
PDGFRA-201ENST00000257290 OR5AL1P0C617 328 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 TMEM225BP0DP42 221 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 IER3P46695 156 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 TMEM170AQ8WVE7 144 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 RTP4Q96DX8 246 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 ADTRPQ96IZ2 230 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 FER1L6-AS2Q96M78 137 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 A0A1W2PP11 408 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 H3BSH0 61 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 FCN3O75636 299 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 RGNQ15493 299 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 Q1RN00 199 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 SYT14P1Q58G82 188 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 MBOAT2Q6ZWT7 520 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 PHYKPLQ8IUZ5 450 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 UMODL1-AS1Q8N2C9 162 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 CYB561D1Q8N8Q1 229 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 NEIL2Q969S2 332 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 NAA60Q9H7X0 242 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 FGF21Q9NSA1 209 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 FXYD1O00168 92 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 PLPP1O14494 284 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 CD79AP11912 226 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 CCKBRP32239 447 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 OPRM1P35372 400 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 ZNF252P-AS1Q0IIN9 211 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 PCBP2Q15366 365 aaKnown RBP eCLIP6□□□□□ -1.45
PDGFRA-201ENST00000257290 TIMM23BQ5SRD1 257 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 AADACL3Q5VUY0 350 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 CDCP2Q5VXM1 449 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 DCAF4L2Q8NA75 395 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 TXNIPQ9H3M7 391 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 MBNL3Q9NUK0 354 aaKnown RBP6□□□□□ -1.45
PDGFRA-201ENST00000257290 SLC5A6Q9Y289 635 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 CHRM2P08172 466 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 RRADP55042 308 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 TIGITQ495A1 244 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 C2orf27AQ580R0 203 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 FAM71E1Q6IPT2 247 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 OR4D11Q8NGI4 311 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 MUCL1Q96DR8 90 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 EGLN1Q9GZT9 426 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 NOX4Q9NPH5 578 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 MTFP1Q9UDX5 166 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 HS3ST3A1Q9Y663 406 aa6□□□□□ -1.45
PDGFRA-201ENST00000257290 B4DGG1 531 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 LANCL1O43813 399 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 CRYAAP02489 173 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 TAS2R45P59539 299 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 SIRPAP78324 504 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 DCDP81605 110 aaKnown RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 ACVR1Q04771 509 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 PDGFRLQ15198 375 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 FRG2Q64ET8 278 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 KCTD18Q6PI47 426 aaPredicted RBP5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 RASL11AQ6T310 242 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 PTH2Q96A98 100 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 TIMD4Q96H15 378 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 FRG2BQ96QU4 278 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 OR2A5Q96R48 311 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 FAM110AQ9BQ89 295 aa5.99□□□□□ -1.45
PDGFRA-201ENST00000257290 GKN1Q9NS71 199 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms