RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 FER1L5A0AVI2 2057 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 DHHO43323 396 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 RBMXL2O75526 392 aaKnown RBP10.42□□□□□ -0.74
USHBP1-201ENST00000252597 TRGC2P03986 189 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 GRB2P62993 217 aaKnown RBP10.42□□□□□ -0.74
USHBP1-201ENST00000252597 EWSR1Q01844 656 aaKnown RBP eCLIP10.42□□□□□ -0.74
USHBP1-201ENST00000252597 PLPP5Q8NEB5 264 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 OR14L1PQ8NHC6 308 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 RDH5Q92781 318 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 RAB39BQ96DA2 213 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 TMPRSS5Q9H3S3 457 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 LRFN1Q9P244 771 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 RARRES3Q9UL19 164 aa10.42□□□□□ -0.74
USHBP1-201ENST00000252597 RBP2P50120 134 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 MLF1P58340 268 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 HLA-BQ31612 363 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 ZNF880Q6PDB4 577 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 ZNF429Q86V71 674 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 LYPD6Q86Y78 171 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 CMTM1Q8IZ96 169 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 OR2C3Q8N628 320 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 INTS12Q96CB8 462 aaKnown RBP10.41□□□□□ -0.74
USHBP1-201ENST00000252597 MEGF10Q96KG7 1140 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 MRGPRX4Q96LA9 322 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 RASL10BQ96S79 203 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 GGACTQ9BVM4 153 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 C8orf33Q9H7E9 229 aaPredicted RBP10.41□□□□□ -0.74
USHBP1-201ENST00000252597 PLEKHA2Q9HB19 425 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 ZNF286AQ9HBT8 521 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 PTRH2Q9Y3E5 179 aaKnown RBP10.41□□□□□ -0.74
USHBP1-201ENST00000252597 HSPA12AO43301 675 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 SOX15O60248 233 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 EIF1BO60739 113 aaKnown RBP10.41□□□□□ -0.74
USHBP1-201ENST00000252597 EIF1P41567 113 aaKnown RBP10.41□□□□□ -0.74
USHBP1-201ENST00000252597 NPBWR2P48146 333 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 CCR5P51681 352 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 DLK1P80370 383 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 ZNF239Q16600 458 aaKnown RBP10.41□□□□□ -0.74
USHBP1-201ENST00000252597 HIST2H3PS2Q5TEC6 136 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 OR2T2Q6IF00 324 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 GUSBP11Q6P575 273 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 CDX2Q99626 313 aaPredicted RBP10.41□□□□□ -0.74
USHBP1-201ENST00000252597 MRPL13Q9BYD1 178 aaKnown RBP10.41□□□□□ -0.74
USHBP1-201ENST00000252597 GPR137BO60478 399 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 PIAS2O75928 621 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 NRASP01111 189 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 CTSDP07339 412 aaPredicted RBP10.41□□□□□ -0.74
USHBP1-201ENST00000252597 DYNLT3P51808 116 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 SHBQ15464 509 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 LHFPL1Q86WI0 220 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 OR10AD1Q8NGE0 317 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 UBE2ZQ9H832 354 aaPredicted RBP10.41□□□□□ -0.74
USHBP1-201ENST00000252597 MOB1AQ9H8S9 216 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 PRDM6Q9NQX0 595 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 DOK5Q9P104 306 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 KCNS2Q9ULS6 477 aa10.41□□□□□ -0.74
USHBP1-201ENST00000252597 KLF2Q9Y5W3 355 aaPredicted RBP10.41□□□□□ -0.74
USHBP1-201ENST00000252597 DSPP15924 2871 aaKnown RBP10.41□□□□□ -0.74
USHBP1-201ENST00000252597 CRYM-AS1A6NIL9 109 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 PHOX2AO14813 284 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 ZNF32P17041 273 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 GALNSP34059 522 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 RPS23P62266 143 aaKnown RBP10.4□□□□□ -0.74
USHBP1-201ENST00000252597 RNF212Q495C1 297 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 ZNF468Q5VIY5 522 aaPredicted RBP10.4□□□□□ -0.74
USHBP1-201ENST00000252597 FAM131CQ96AQ9 280 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 ZNF501Q96CX3 271 aaPredicted RBP10.4□□□□□ -0.74
USHBP1-201ENST00000252597 SNX22Q96L94 193 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 NIPSNAP3BQ9BS92 247 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 TIMM10BQ9Y5J6 103 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 WSB1Q9Y6I7 421 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 FREM1Q5H8C1 2179 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 RBFOX3A6NFN3 312 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 PPP1R2P9O14990 202 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 RNF224P0DH78 156 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 CCL3P10147 92 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 RAB5CP51148 216 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 RND3P61587 244 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 SPNS3Q6ZMD2 512 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 SLC16A14Q7RTX9 510 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 NTNG2Q96CW9 530 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 MVB12AQ96EY5 273 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 GAR1Q9NY12 217 aaKnown RBP10.4□□□□□ -0.74
USHBP1-201ENST00000252597 IL36RNQ9UBH0 155 aa10.4□□□□□ -0.74
USHBP1-201ENST00000252597 SHISA7A6NL88 538 aa10.4□□□□□ -0.75
USHBP1-201ENST00000252597 MSTNO14793 375 aa10.4□□□□□ -0.75
USHBP1-201ENST00000252597 DANCRP0C864 163 aa10.4□□□□□ -0.75
USHBP1-201ENST00000252597 ALDH3B1P43353 468 aa10.4□□□□□ -0.75
USHBP1-201ENST00000252597 ZXDAP98168 799 aa10.4□□□□□ -0.75
USHBP1-201ENST00000252597 SLC25A47Q6Q0C1 308 aa10.4□□□□□ -0.75
USHBP1-201ENST00000252597 LIAT1Q6ZQX7 453 aa10.4□□□□□ -0.75
USHBP1-201ENST00000252597 BEND4Q6ZU67 534 aa10.4□□□□□ -0.75
USHBP1-201ENST00000252597 SLC25A45Q8N413 288 aa10.4□□□□□ -0.75
USHBP1-201ENST00000252597 OR1K1Q8NGR3 316 aa10.4□□□□□ -0.75
USHBP1-201ENST00000252597 ZNF488Q96MN9 340 aa10.4□□□□□ -0.75
USHBP1-201ENST00000252597 WFIKKN1Q96NZ8 548 aa10.4□□□□□ -0.75
USHBP1-201ENST00000252597 SLC7A10Q9NS82 523 aa10.4□□□□□ -0.75
USHBP1-201ENST00000252597 GAB2Q9UQC2 676 aa10.4□□□□□ -0.75
USHBP1-201ENST00000252597 CXCL13O43927 109 aa10.39□□□□□ -0.75
USHBP1-201ENST00000252597 IGHMP01871 453 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms