RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 DEGS1O15121 323 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 PAX1P15863 534 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 GABRR1P24046 479 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 MDH2P40926 338 aaKnown RBP10.87□□□□□ -0.67
LSM8-201ENST00000249299 AP3S2P59780 193 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 ACTBP60709 375 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 ACTG1P63261 375 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 SRSF7Q16629 238 aaKnown RBP eCLIP10.87□□□□□ -0.67
LSM8-201ENST00000249299 PIGYQ3MUY2 71 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 MOGAT2Q3SYC2 334 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 PLAC9Q5JTB6 97 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 Q6P435 159 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 ZNF295-AS1Q8N0V1 137 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 GPX8Q8TED1 209 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 ARHGAP5-AS1Q96IT6 56 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 ZNF488Q96MN9 340 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 SDHCQ99643 169 aaPredicted RBP10.87□□□□□ -0.67
LSM8-201ENST00000249299 PECRQ9BY49 303 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 CHST6Q9GZX3 395 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 NLKQ9UBE8 527 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 DNAJB11Q9UBS4 358 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 A1L4Q6 167 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 OOEPA6NGQ2 149 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 MCRIP1C9JLW8 97 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 H7C1Q1 480 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 ECDO95905 644 aaPredicted RBP10.86□□□□□ -0.67
LSM8-201ENST00000249299 HAND1O96004 215 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 GSTT2BP0CG30 244 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 DTYMKP23919 212 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 EFNA4P52798 201 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 TMEM33P57088 247 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 IKZF1Q13422 519 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 SPRNQ5BIV9 151 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 C16orf87Q6PH81 154 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 SNX29P2Q8IUI4 249 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 ZCCHC24Q8N2G6 241 aaKnown RBP10.86□□□□□ -0.67
LSM8-201ENST00000249299 PPP1R35Q8TAP8 253 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 SEH1LQ96EE3 360 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 THAP7Q9BT49 309 aaPredicted RBP10.86□□□□□ -0.67
LSM8-201ENST00000249299 NCOR1P1Q9H4R4 102 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 MTFP1Q9UDX5 166 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 KCNK7Q9Y2U2 307 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 WIPI2Q9Y4P8 454 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 PKDREJQ9NTG1 2253 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 ICE1Q9Y2F5 2266 aa10.86□□□□□ -0.67
LSM8-201ENST00000249299 PPIAL4EA0A075B759 164 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 TRBV6-6A0A0A6YYG2 114 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 OR2AT4A6NND4 320 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 PPIAL4DF5H284 164 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 RP2O75695 350 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 RBBP9O75884 186 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 OR2H2O95918 312 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 HPXP02790 462 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 CSN2P05814 226 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 PPIAL4FP0DN26 164 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 PSG2P11465 335 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 IL7P13232 177 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 GNB3P16520 340 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 PRDX2P32119 198 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 GNG2P59768 71 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 SCN1BQ07699 218 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 TRIQKQ629K1 86 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 STUMQ69YW2 141 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 PEG10Q86TG7 708 aaKnown RBP10.85□□□□□ -0.67
LSM8-201ENST00000249299 LINC00528Q8N1L1 170 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 GAPTQ8N292 157 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 ZNF561Q8N587 486 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 OR5D13Q8NGL4 314 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 ANGPTL6Q8NI99 470 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 SETD6Q8TBK2 473 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 CCL17Q92583 94 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 TRIM63Q969Q1 353 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 SDSLQ96GA7 329 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 FAM234AQ9H0X4 552 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 WDR13Q9H1Z4 485 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 CHODLQ9H9P2 273 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 BARX1Q9HBU1 254 aaPredicted RBP10.85□□□□□ -0.67
LSM8-201ENST00000249299 ZNF701Q9NV72 531 aaPredicted RBP10.85□□□□□ -0.67
LSM8-201ENST00000249299 ZNF222Q9UK12 451 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 ANAPC10Q9UM13 185 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 PPIAL4AQ9Y536 164 aa10.85□□□□□ -0.67
LSM8-201ENST00000249299 TRAV24A0A0B4J272 114 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 IGHV3-64DA0A0J9YX35 117 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 TMEM235A6NFC5 223 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 RFPL4AA6NLU0 287 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 RFPL4AL1F8VTS6 287 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 J3QRK9 145 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 WNT9BO14905 357 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 CSF3P09919 207 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 ZNF44P15621 663 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 TBPP20226 339 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 RCVRNP35243 200 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 MRPS15P82914 257 aaKnown RBP10.84□□□□□ -0.67
LSM8-201ENST00000249299 RELBQ01201 579 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 DYRK1AQ13627 763 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 Q6ZS49 121 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 C6orf201Q7Z4U5 140 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 IZUMO1Q8IYV9 350 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 OR8H2Q8N162 312 aa10.84□□□□□ -0.67
LSM8-201ENST00000249299 MUC20Q8N307 709 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms