RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 MRPS24Q96EL2 167 aaKnown RBP6.78□□□□□ -1.32
CXCR4-201ENST00000241393 PIK3IP1Q96FE7 263 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 RTBDNQ9BSG5 229 aaPredicted RBP6.78□□□□□ -1.32
CXCR4-201ENST00000241393 RBM24Q9BX46 236 aaKnown RBP6.78□□□□□ -1.32
CXCR4-201ENST00000241393 PECRQ9BY49 303 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 RGCCQ9H4X1 137 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 CHODLQ9H9P2 273 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 DECR2Q9NUI1 292 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 PLEK2Q9NYT0 353 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 HSF4Q9ULV5 492 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 MEMO1Q9Y316 297 aa6.78□□□□□ -1.32
CXCR4-201ENST00000241393 NCOA6Q14686 2063 aaPredicted RBP6.78□□□□□ -1.32
CXCR4-201ENST00000241393 A0A1W2PP11 408 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 OR5H15A6NDH6 313 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 EEF1E1-BLOC1S5C9J1V9 151 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 SMAD9O15198 467 aaKnown RBP6.77□□□□□ -1.32
CXCR4-201ENST00000241393 FGF16O43320 207 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 SYNGR3O43761 229 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 P04436 131 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 HPNP05981 417 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 CELA2AP08217 269 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 FCGR2AP12318 317 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 RPS2P15880 293 aaKnown RBP6.77□□□□□ -1.32
CXCR4-201ENST00000241393 DTYMKP23919 212 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 NPY4RP50391 375 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 B3GALT5-AS1P59052 145 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 RPL15P61313 204 aaKnown RBP6.77□□□□□ -1.32
CXCR4-201ENST00000241393 PPIAP62937 165 aaKnown RBP6.77□□□□□ -1.32
CXCR4-201ENST00000241393 EIF5AP63241 154 aaKnown RBP6.77□□□□□ -1.32
CXCR4-201ENST00000241393 SUPT4H1P63272 117 aaKnown RBP6.77□□□□□ -1.32
CXCR4-201ENST00000241393 LRRC37A5PQ49AS3 106 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 AADACL3Q5VUY0 350 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 H3F3CQ6NXT2 135 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 PLXDC2Q6UX71 529 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 ASCL4Q6XD76 172 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 CSNK2A3Q8NEV1 391 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 SEMA6DQ8NFY4 1073 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 OR13G1Q8NGZ3 307 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 C2orf50Q96LR7 162 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 TECTBQ96PL2 329 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 AQP10Q96PS8 301 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 RNF126Q9BV68 326 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 C1QTNF6Q9BXI9 259 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 METTL9Q9H1A3 318 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 TMEM100Q9NV29 134 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 PIGLQ9Y2B2 252 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 CSAG2Q9Y5P2 127 aa6.77□□□□□ -1.32
CXCR4-201ENST00000241393 TNRC18O15417 2968 aaPredicted RBP6.77□□□□□ -1.33
CXCR4-201ENST00000241393 C13orf42A0A1B0GVH6 325 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 OR6C6A6NF89 314 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 TNFSF11O14788 317 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 TAAR5O14804 337 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 SGCEO43556 437 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 CTSDP07339 412 aaPredicted RBP6.77□□□□□ -1.33
CXCR4-201ENST00000241393 CCL4P13236 92 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 ANOS1P23352 680 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 PCBD1P61457 104 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 IL15RAQ13261 267 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 CHRFAM7AQ494W8 412 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 TMEM42Q69YG0 159 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 C1QL2Q7Z5L3 287 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 RTN4RL2Q86UN3 420 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 BAP18Q8IXM2 172 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 POC1AQ8NBT0 407 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 RELL2Q8NC24 303 aaPredicted RBP6.77□□□□□ -1.33
CXCR4-201ENST00000241393 OR1F12Q8NHA8 337 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 DCUN1D4Q92564 292 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 MARC2Q969Z3 335 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 SGK3Q96BR1 496 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 SARAFQ96BY9 339 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 FBXO17Q96EF6 278 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 ZPBPQ9BS86 351 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 SRXN1Q9BYN0 137 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 PCDHB16Q9NRJ7 776 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 TMEM38BQ9NVV0 291 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 SLC39A1Q9NY26 324 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 EHFQ9NZC4 300 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 IL36GQ9NZH8 169 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 ATPIF1Q9UII2 106 aa6.77□□□□□ -1.33
CXCR4-201ENST00000241393 C14orf166Q9Y224 244 aaKnown RBP6.77□□□□□ -1.33
CXCR4-201ENST00000241393 IGHV3-15A0A0B4J1V0 119 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 C5orf63A6NC05 138 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 ZNF716A6NP11 495 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 SERPINA5P05154 406 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 PGAM2P15259 253 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 SERPINA2P20848 420 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 PLA2G5P39877 138 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 PMELP40967 661 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 CARD18P57730 90 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 ZNF273Q14593 569 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 ATXN7L3Q14CW9 347 aaPredicted RBP6.76□□□□□ -1.33
CXCR4-201ENST00000241393 ELP2Q6IA86 826 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 EIF5AL1Q6IS14 154 aaKnown RBP6.76□□□□□ -1.33
CXCR4-201ENST00000241393 GALNTL5Q7Z4T8 443 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 GGNQ86UU5 652 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 LRRC18Q8N456 261 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 ZBTB44Q8NCP5 570 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 TMEM45BQ96B21 275 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 ADGRG7Q96K78 797 aa6.76□□□□□ -1.33
CXCR4-201ENST00000241393 JSRP1Q96MG2 331 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms