RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 SELENOVP59797 346 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 RRAS2P62070 204 aaPredicted RBP12.88□□□□□ -0.35
HDHD3-201ENST00000238379 MRPS15P82914 257 aaKnown RBP12.88□□□□□ -0.35
HDHD3-201ENST00000238379 SNTB1Q13884 538 aaKnown RBP12.88□□□□□ -0.35
HDHD3-201ENST00000238379 ST3GAL2Q16842 350 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 Q6P435 159 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 Q6ZPA2 131 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 SLC36A1Q7Z2H8 476 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 ARRDC1Q8N5I2 433 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 OR5AP2Q8NGF4 316 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 OR5H2Q8NGV7 314 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 CA5BP1Q8WTZ4 195 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 SPACA1Q9HBV2 294 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 C12orf4Q9NQ89 552 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 DIDO1Q9BTC0 2240 aaKnown RBP12.87□□□□□ -0.35
HDHD3-201ENST00000238379 TRAV24A0A0B4J272 114 aa12.87□□□□□ -0.35
HDHD3-201ENST00000238379 A6NLC8 198 aa12.87□□□□□ -0.35
HDHD3-201ENST00000238379 NXPH2O95156 264 aa12.87□□□□□ -0.35
HDHD3-201ENST00000238379 HPXP02790 462 aa12.87□□□□□ -0.35
HDHD3-201ENST00000238379 ZNF146Q15072 292 aa12.87□□□□□ -0.35
HDHD3-201ENST00000238379 NCMAPQ5T1S8 102 aa12.87□□□□□ -0.35
HDHD3-201ENST00000238379 ELMOD3Q96FG2 381 aa12.87□□□□□ -0.35
HDHD3-201ENST00000238379 MED30Q96HR3 178 aa12.87□□□□□ -0.35
HDHD3-201ENST00000238379 ST6GAL2Q96JF0 529 aa12.87□□□□□ -0.35
HDHD3-201ENST00000238379 OR51J1Q9H342 316 aa12.87□□□□□ -0.35
HDHD3-201ENST00000238379 UFSP2Q9NUQ7 469 aa12.87□□□□□ -0.35
HDHD3-201ENST00000238379 ATP23Q9Y6H3 246 aa12.87□□□□□ -0.35
HDHD3-201ENST00000238379 ICE1Q9Y2F5 2266 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 MCRIP1C9JLW8 97 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 RLN1P04808 185 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 IL5P05113 134 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 VSIG10L2P0DP72 767 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 OR3A3P47888 321 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 SORDQ00796 357 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 CBX3Q13185 183 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 ADIPOQQ15848 244 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 CHRFAM7AQ494W8 412 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 ADAM5Q6NVV9 412 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 GLDNQ6ZMI3 551 aaPredicted RBP12.86□□□□□ -0.35
HDHD3-201ENST00000238379 OVCH2Q7RTZ1 564 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 SUMF2Q8NBJ7 301 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 ESRP2Q9H6T0 727 aaKnown RBP12.86□□□□□ -0.35
HDHD3-201ENST00000238379 NDRG3Q9UGV2 375 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 ANXA10Q9UJ72 324 aa12.86□□□□□ -0.35
HDHD3-201ENST00000238379 OR2AT4A6NND4 320 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 DEGS1O15121 323 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 NAPSAO96009 420 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 GLAP06280 429 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 GMFBP60983 142 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 SPRNQ5BIV9 151 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 ATPAF1Q5TC12 328 aaPredicted RBP12.85□□□□□ -0.35
HDHD3-201ENST00000238379 METTL11BQ5VVY1 283 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 TERB2Q8NHR7 220 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 LINC01560Q8TB33 94 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 PRR7Q8TB68 274 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 MEGF10Q96KG7 1140 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 OR2V2Q96R30 315 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 ALX4Q9H161 411 aaPredicted RBP12.85□□□□□ -0.35
HDHD3-201ENST00000238379 WDR13Q9H1Z4 485 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 KCNJ16Q9NPI9 418 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 C1orf123Q9NWV4 160 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 ZNF221Q9UK13 617 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 HIVEP3Q5T1R4 2406 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 CFAP46Q8IYW2 2715 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 TMEM82A0PJX8 343 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 A8MV72 311 aaPredicted RBP12.85□□□□□ -0.35
HDHD3-201ENST00000238379 SHISA9B4DS77 424 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 SDCBPO00560 298 aaPredicted RBP12.85□□□□□ -0.35
HDHD3-201ENST00000238379 HSPB6O14558 160 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 HS3ST1O14792 307 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 WNT9BO14905 357 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 SPRY3O43610 288 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 OR4A8P0C604 315 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 ZNF44P15621 663 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 ZNF81P51508 661 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 HOXA4Q00056 320 aaPredicted RBP12.85□□□□□ -0.35
HDHD3-201ENST00000238379 CDK10Q15131 360 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 SPIN3Q5JUX0 258 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 DMRTC2Q8IXT2 367 aaPredicted RBP12.85□□□□□ -0.35
HDHD3-201ENST00000238379 RDH5Q92781 318 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 LRRC46Q96FV0 321 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 PLPPR2Q96GM1 343 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 SEC22CQ9BRL7 303 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 DPCDQ9BVM2 203 aaPredicted RBP12.85□□□□□ -0.35
HDHD3-201ENST00000238379 MED28Q9H204 178 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 PPA2Q9H2U2 334 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 EHFQ9NZC4 300 aa12.85□□□□□ -0.35
HDHD3-201ENST00000238379 ANKHD1Q8IWZ3 2542 aaKnown RBP12.84□□□□□ -0.35
HDHD3-201ENST00000238379 ROS1P08922 2347 aa12.84□□□□□ -0.35
HDHD3-201ENST00000238379 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.84□□□□□ -0.35
HDHD3-201ENST00000238379 OR2H2O95918 312 aa12.84□□□□□ -0.35
HDHD3-201ENST00000238379 CFHR2P36980 270 aa12.84□□□□□ -0.35
HDHD3-201ENST00000238379 UQCRFS1P47985 274 aa12.84□□□□□ -0.35
HDHD3-201ENST00000238379 TFF3Q07654 80 aa12.84□□□□□ -0.35
HDHD3-201ENST00000238379 CD276Q5ZPR3 534 aa12.84□□□□□ -0.35
HDHD3-201ENST00000238379 ACP7Q6ZNF0 438 aa12.84□□□□□ -0.35
HDHD3-201ENST00000238379 LHFPL1Q86WI0 220 aa12.84□□□□□ -0.35
HDHD3-201ENST00000238379 GALNT11Q8NCW6 608 aa12.84□□□□□ -0.35
HDHD3-201ENST00000238379 DACT3Q96B18 629 aaPredicted RBP12.84□□□□□ -0.35
HDHD3-201ENST00000238379 FN3KRPQ9HA64 309 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms