RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 C5orf66Q9H5L9 145 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 GLRX2Q9NS18 164 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 TRAPPC2LH3BP13 241 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 ISLRO14498 428 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 SLC38A11Q08AI6 406 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 FUT5Q11128 374 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 CST9Q5W186 159 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 ZNF776Q68DI1 518 aaPredicted RBP11.39□□□□□ -0.59
VAMP4-201ENST00000236192 KIRREL2Q6UWL6 708 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 SPPL3Q8TCT6 385 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 MVB12AQ96EY5 273 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 ADAT3Q96EY9 351 aaPredicted RBP11.39□□□□□ -0.59
VAMP4-201ENST00000236192 ZNF665Q9H7R5 613 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 PIGLQ9Y2B2 252 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 RPS15P62841 145 aaKnown RBP11.39□□□□□ -0.59
VAMP4-201ENST00000236192 CDPF1Q6NVV7 123 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 BHLHA9Q7RTU4 235 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 LINC01465Q8N7H1 131 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 MSI2Q96DH6 328 aaKnown RBP11.39□□□□□ -0.59
VAMP4-201ENST00000236192 TUBD1Q9UJT1 453 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 MRPS18BQ9Y676 258 aaKnown RBP11.39□□□□□ -0.59
VAMP4-201ENST00000236192 CDK5RAP2Q96SN8 1893 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 NUP214P35658 2090 aaPredicted RBP11.39□□□□□ -0.59
VAMP4-201ENST00000236192 TRBV5-7A0A0A0MS05 114 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 A0A1B0GU03 582 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 GDF9O60383 454 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 KBTBD11O94819 623 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 IGLV3-27P01718 113 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 TPTE2P1Q5T6R2 138 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 TEX38Q6PEX7 206 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 ABHD3Q8WU67 409 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 RSG1Q9BU20 258 aa11.39□□□□□ -0.59
VAMP4-201ENST00000236192 A0A1W2PRU2 124 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 C4orf47A7E2U8 309 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 TMEM238C9JI98 176 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 CTSVO60911 334 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 TUSC2O75896 110 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 DLX2Q07687 328 aaPredicted RBP11.38□□□□□ -0.59
VAMP4-201ENST00000236192 SPRYD7Q5W111 196 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 OR2A5Q96R48 311 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 TWSG1Q9GZX9 223 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 APCSP02743 223 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 FASLGP48023 281 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 NPBWR2P48146 333 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 GAS1P54826 345 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 SERF2P84101 59 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 CADM4Q8NFZ8 388 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.38□□□□□ -0.59
VAMP4-201ENST00000236192 HSPB8Q9UJY1 196 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 CES1P1Q9UKY3 287 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 FGF17O60258 216 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 TCN2P20062 427 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 RUNX1Q01196 453 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 MLF2Q15773 248 aaPredicted RBP11.38□□□□□ -0.59
VAMP4-201ENST00000236192 DGAT2L6Q6ZPD8 337 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 OR13G1Q8NGZ3 307 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 OR2V1Q8NHB1 315 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 WFDC6Q9BQY6 131 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 NUDT22Q9BRQ3 303 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 TRBV6-7A0A0A0MS04 114 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 A6NCN8 305 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 CHST1O43916 411 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 PAGE4O60829 102 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 CA11O75493 328 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 FCER1GP30273 86 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 UBE2NP61088 152 aaKnown RBP11.38□□□□□ -0.59
VAMP4-201ENST00000236192 MST1LQ2TV78 715 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 ZNF547Q8IVP9 402 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 ASB5Q8WWX0 329 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 MMABQ96EY8 250 aaPredicted RBP11.38□□□□□ -0.59
VAMP4-201ENST00000236192 MBNL1Q9NR56 388 aaKnown RBP11.38□□□□□ -0.59
VAMP4-201ENST00000236192 PLEK2Q9NYT0 353 aa11.38□□□□□ -0.59
VAMP4-201ENST00000236192 FBLL1A6NHQ2 334 aaKnown RBP11.37□□□□□ -0.59
VAMP4-201ENST00000236192 LRRC3CA6NJW4 275 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 HIST1H1EP10412 219 aaKnown RBP11.37□□□□□ -0.59
VAMP4-201ENST00000236192 SELEP16581 610 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 GNG4P50150 75 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 GJD4Q96KN9 370 aaPredicted RBP11.37□□□□□ -0.59
VAMP4-201ENST00000236192 TPSD1Q9BZJ3 242 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 TRIP11Q15643 1979 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 CCL16O15467 120 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 CA2P00918 260 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 CLDND2Q8NHS1 167 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 TXNRD2Q9NNW7 524 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 IGLV3-16A0A075B6K0 115 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 K7EQM0 130 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 SLC31A1O15431 190 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 SOCS1O15524 211 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 SHBQ15464 509 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.37□□□□□ -0.59
VAMP4-201ENST00000236192 IRF7Q92985 503 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 PECRQ9BY49 303 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 GPR62Q9BZJ7 368 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 CST9LQ9H4G1 147 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 COX11Q9Y6N1 276 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 CTXND1A0A1B0GTU2 59 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 UQCRFS1P47985 274 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 CKS1BP61024 79 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 OTPQ5XKR4 325 aa11.37□□□□□ -0.59
VAMP4-201ENST00000236192 C20orf144Q9BQM9 153 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms