RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SUMO1P63165 101 aaKnown RBP11.35□□□□□ -0.59
MSH2-201ENST00000233146 CSNK2A1P68400 391 aaPredicted RBP11.35□□□□□ -0.59
MSH2-201ENST00000233146 TMEM108Q6UXF1 575 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 LYZL2Q7Z4W2 148 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 AMZ2Q86W34 360 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 LRRC25Q8N386 305 aaPredicted RBP11.35□□□□□ -0.59
MSH2-201ENST00000233146 CSNK2A3Q8NEV1 391 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 ANAPC16Q96DE5 110 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 SMIM7Q9BQ49 75 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 REPIN1Q9BWE0 567 aaKnown RBP11.35□□□□□ -0.59
MSH2-201ENST00000233146 MEGF9Q9H1U4 602 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 ZNF703Q9H7S9 590 aaPredicted RBP11.35□□□□□ -0.59
MSH2-201ENST00000233146 DNAJB12Q9NXW2 375 aaKnown RBP11.35□□□□□ -0.59
MSH2-201ENST00000233146 DUSP1P28562 367 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 BTN3A2P78410 334 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 RTP5Q14D33 572 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 TRIM61Q5EBN2 209 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 OTPQ5XKR4 325 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 ZAR1Q86SH2 424 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 MCEMP1Q8IX19 187 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 ZNF519Q8TB69 540 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 SLAMF6Q96DU3 332 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 REEP6Q96HR9 211 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 CAPNS2Q96L46 248 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 OR6C1Q96RD1 312 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 SOHLH2Q9NX45 425 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 CLEC4EQ9ULY5 219 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 SLC5A6Q9Y289 635 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 LOC107986453A0A1B0GWG9 222 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 A0A1W2PRS3 328 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 SNU13P55769 128 aaKnown RBP11.35□□□□□ -0.59
MSH2-201ENST00000233146 RUNX1Q01196 453 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 TMEM187Q14656 261 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 C22orf39Q6P5X5 142 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 SLC22A24Q8N4F4 322 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 DDIT4LQ96D03 193 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 WDYHV1Q96HA8 205 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 ST6GALNAC5Q9BVH7 336 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 ELOVL5Q9NYP7 299 aa11.35□□□□□ -0.59
MSH2-201ENST00000233146 GOLGA4Q13439 2230 aaKnown RBP11.34□□□□□ -0.59
MSH2-201ENST00000233146 ECI1P42126 302 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 GNMTQ14749 295 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 C20orf196Q8IYI0 205 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 OR5AU1Q8NGC0 362 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 HIF3AQ9Y2N7 669 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 LOC102724200A0A096LPH7 203 aaPredicted RBP11.34□□□□□ -0.59
MSH2-201ENST00000233146 IGKV1-8A0A0C4DH67 115 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 A0A0G2JLL6 359 aaPredicted RBP11.34□□□□□ -0.59
MSH2-201ENST00000233146 IGHV1-69-2A0A0G2JMI3 117 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 CORTO00230 105 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 ISG15P05161 165 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 IL3RAP26951 378 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 TSPOP30536 169 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 RSPO2Q6UXX9 243 aaPredicted RBP11.34□□□□□ -0.59
MSH2-201ENST00000233146 PRRT2Q7Z6L0 340 aaPredicted RBP11.34□□□□□ -0.59
MSH2-201ENST00000233146 LRTM2Q8N967 370 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 SLC35D1Q9NTN3 355 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 CDC42EP3Q9UKI2 254 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 KIAA2026Q5HYC2 2103 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 LRRC3CA6NJW4 275 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 SRSF10O75494 262 aaKnown RBP11.34□□□□□ -0.59
MSH2-201ENST00000233146 KBTBD11O94819 623 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 BCL6P41182 706 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 TCTN1Q2MV58 587 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 LGI3Q8N145 548 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 C18orf12Q96KH6 178 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 SLC46A1Q96NT5 459 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 LMF2Q9BU23 707 aaKnown RBP11.34□□□□□ -0.59
MSH2-201ENST00000233146 ZNF160Q9HCG1 818 aa11.34□□□□□ -0.59
MSH2-201ENST00000233146 C9orf172C9J069 976 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 AADACP22760 399 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 CD70P32970 193 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 TCF24Q7RTU0 167 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 WFDC8Q8IUA0 241 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 FAM3CQ92520 227 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 MTIF3Q9H2K0 278 aaKnown RBP11.33□□□□□ -0.6
MSH2-201ENST00000233146 C19orf53Q9UNZ5 99 aaPredicted RBP11.33□□□□□ -0.6
MSH2-201ENST00000233146 ARL6IP1Q15041 203 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 SP6Q3SY56 376 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 ALG10Q5BKT4 473 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 ZNF787Q6DD87 383 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 SLC18B1Q6NT16 456 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 MEX3BQ6ZN04 569 aaKnown RBP11.33□□□□□ -0.6
MSH2-201ENST00000233146 MARCH3Q86UD3 253 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 ZNF547Q8IVP9 402 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 C8orf44Q96CB5 159 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 DECR2Q9NUI1 292 aa11.33□□□□□ -0.6
MSH2-201ENST00000233146 TRAV34A0A0B4J273 112 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 IGLC7A0M8Q6 106 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 CEBPZOSA8MTT3 80 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 BGLAPP02818 100 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 HPNP05981 417 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 ARFRP1Q13795 201 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 MSMO1Q15800 293 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 EMC4Q5J8M3 183 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 FHL5Q5TD97 284 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 RNF44Q7L0R7 432 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 OR5C1Q8NGR4 320 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 OR4S2Q8NH73 311 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 OVCA2Q8WZ82 227 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms