RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 NCOA6Q14686 2063 aaPredicted RBP12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 KIR2DS5A0A0G2JLQ3 304 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 A0A0G2JNG1 304 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 CCDC85CA6NKD9 419 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 KIR2DS3K7RE56 304 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 GSTP1P09211 210 aaKnown RBP12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 CD33P20138 364 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 WNT5AP41221 380 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 PIGPP57054 158 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 KIR2DS5Q14953 304 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 H1FNTQ75WM6 255 aaPredicted RBP12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 ADIPOR1Q96A54 375 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 ADGRG7Q96K78 797 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 GPHA2Q96T91 129 aa12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 STRAPQ9Y3F4 350 aaKnown RBP12.39□□□□□ -0.43
PCDHB3-201ENST00000231130 FRG2CA6NGY1 282 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 LINC01565O15544 149 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 HPNP05981 417 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 THBS4P35443 961 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 P2RY6Q15077 328 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 TAF9Q16594 264 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 HIKESHIQ53FT3 197 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 ZNF774Q6NX45 483 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 TMEM217Q8N7C4 229 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 OR51B6Q9H340 312 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 ALG1L2C9J202 215 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 HSD17B6O14756 317 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 GPR137BO60478 399 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 SEMA4FO95754 770 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 OR5AC1P0C628 307 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 CD82P27701 267 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 IGLV3-21P80748 117 aaPredicted RBP12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 FZD2Q14332 565 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 VAX1Q5SQQ9 334 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 OR13D1Q8NGV5 346 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 ZNF721Q8TF20 911 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 EMG1Q92979 244 aaKnown RBP12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 PGAM5Q96HS1 289 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 SCRT1Q9BWW7 348 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 FKBP11Q9NYL4 201 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 TRAPPC6AO75865 159 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 DDAH2O95865 285 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 FGF5P12034 268 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 MYF5P13349 255 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 APOBEC1P41238 236 aaKnown RBP12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 PTTG1IPP53801 180 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 MRPS11P82912 194 aaKnown RBP12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 KISS1Q15726 138 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 SDSLQ96GA7 329 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 MAGT1Q9H0U3 335 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 CUTCQ9NTM9 273 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 FOXJ2Q9P0K8 574 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 SRPK3Q9UPE1 567 aa12.38□□□□□ -0.43
PCDHB3-201ENST00000231130 TNFRSF10CO14798 259 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 GCGP01275 180 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 DAP3P51398 398 aaKnown RBP12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 EFNA3P52797 238 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 ELLP55199 621 aaPredicted RBP12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 ADIRFQ15847 76 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 FAM189A2Q15884 450 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 FBXW12Q6X9E4 464 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 OR10A7Q8NGE5 316 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 LMX1AQ8TE12 382 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 C22orf15Q8WYQ4 148 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 IL22RA2Q969J5 263 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 YPEL4Q96NS1 127 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 MCTS1Q9ULC4 181 aaKnown RBP12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 OSGIN2Q9Y236 505 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 VPS13AQ96RL7 3174 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 FAM230AA0A1W2PPH8 454 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 A0A1W2PPQ1 181 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 DEDDO75618 318 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 SRP19P09132 144 aaKnown RBP12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 UCP3P55916 312 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 TLE4Q04727 773 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 DCAF10Q5QP82 559 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 ZNF100Q8IYN0 542 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 OR52M1Q8NGK5 317 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 KCNK17Q96T54 332 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 VN1R1Q9GZP7 353 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 WWTR1Q9GZV5 400 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 PPIAL4AQ9Y536 164 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 ESPL1Q14674 2120 aa12.37□□□□□ -0.43
PCDHB3-201ENST00000231130 IGKV1-9A0A0C4DH69 117 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 E9PLN8 166 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 RPL36A-HNRNPH2H7BZ11 118 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 ONECUT2O95948 504 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 MAS1LP35410 378 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 TAS2R46P59540 309 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 FOXF1Q12946 379 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 DEFB133Q30KQ1 61 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 DNLZQ5SXM8 178 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 RTL10Q7L3V2 364 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 ARHGEF39Q8N4T4 335 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 OR11L1Q8NGX0 322 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 PLEKHA2Q9HB19 425 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 PARD6AQ9NPB6 346 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 KLRF1Q9NZS2 232 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 PAM16Q9Y3D7 125 aa12.36□□□□□ -0.43
PCDHB3-201ENST00000231130 E5RGE8 158 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms