RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 OR2H1Q9GZK4 316 aa21.53■■□□□ 1.04
RUNDC3A-201ENST00000225441 RCC2Q9P258 522 aaKnown RBP21.53■■□□□ 1.04
RUNDC3A-201ENST00000225441 IGKV1-27A0A075B6S5 117 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 hCG_38984A0A1B0GV85 526 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 CEACAM4O75871 244 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 HMGN3Q15651 99 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 SRSF7Q16629 238 aaKnown RBP eCLIP21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 CCDC71LQ8N9Z2 235 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 SPSB4Q96A44 273 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 FOXB1Q99853 325 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 DKK4Q9UBT3 224 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 KLF13Q9Y2Y9 288 aaPredicted RBP21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 NME2P1O60361 137 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 RFPL3SP0C7P2 107 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 NME2P22392 152 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 HTR5AP47898 357 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 PDZK1IP1Q13113 114 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 ZNF775Q96BV0 537 aaPredicted RBP21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 CYYR1Q96J86 154 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 PLSCR2Q9NRY7 297 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 AMDHD2Q9Y303 409 aa21.52■■□□□ 1.04
RUNDC3A-201ENST00000225441 ZNF816-ZNF321PA0A0X1KG74 233 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 PDCD6O75340 191 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 MED6O75586 246 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 CD5P06127 495 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 CD46P15529 392 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 ARHGDIBP52566 201 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 PSG4Q00888 419 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 MALLQ13021 153 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 DMRTC1Q5HYR2 192 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 IGFL2Q6UWQ7 119 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 FAM185AQ8N0U4 392 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 LGI3Q8N145 548 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 Q8NFD4 153 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 OR2AE1Q8NHA4 323 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 RTN4IP1Q8WWV3 396 aaPredicted RBP21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 MRPL24Q96A35 216 aaKnown RBP21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 SULT4A1Q9BR01 284 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 HDHD3Q9BSH5 251 aaPredicted RBP21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 TLNRD1Q9H1K6 362 aa21.51■■□□□ 1.03
RUNDC3A-201ENST00000225441 RNASEK-C17orf49H0YIS7 233 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 MSTNO14793 375 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 SIGLEC5O15389 551 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 ANGPTL7O43827 346 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 FBXO24O75426 580 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 GLP1RP43220 463 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 SRPXP78539 464 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 IL13RA2Q14627 380 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 HFEQ30201 348 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 LIAT1Q6ZQX7 453 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 Q6ZS49 121 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 SPACA3Q8IXA5 215 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 CPNE4Q96A23 557 aaPredicted RBP21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 MOB3AQ96BX8 217 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 C18orf12Q96KH6 178 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 PRDM14Q9GZV8 571 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 WNT5BQ9H1J7 359 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 HRH4Q9H3N8 390 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 FAM212BQ9NTI7 297 aaPredicted RBP21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 FBXL17Q9UF56 701 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 FBXO9Q9UK97 447 aaPredicted RBP21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 KLF2Q9Y5W3 355 aaPredicted RBP21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 BORCS7-ASMTA0A0B4J1R7 106 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 SPRY1O43609 319 aaPredicted RBP21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 CYTIPO60759 359 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 SEC11BP0C7V7 166 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 ID4P47928 161 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 HGFACQ04756 655 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 KDF1Q8NAX2 398 aaPredicted RBP21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 OR10AD1Q8NGE0 317 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 SLC39A7Q92504 469 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 GPR35Q9HC97 309 aa21.5■■□□□ 1.03
RUNDC3A-201ENST00000225441 GPR137BO60478 399 aa21.49■■□□□ 1.03
RUNDC3A-201ENST00000225441 FARS2O95363 451 aaKnown RBP21.49■■□□□ 1.03
RUNDC3A-201ENST00000225441 PVALBP20472 110 aaPredicted RBP21.49■■□□□ 1.03
RUNDC3A-201ENST00000225441 GDF1P27539 372 aa21.49■■□□□ 1.03
RUNDC3A-201ENST00000225441 DUSP1P28562 367 aa21.49■■□□□ 1.03
RUNDC3A-201ENST00000225441 EIF2S3P41091 472 aaKnown RBP21.49■■□□□ 1.03
RUNDC3A-201ENST00000225441 LPAR6P43657 344 aa21.49■■□□□ 1.03
RUNDC3A-201ENST00000225441 AKR1C2P52895 323 aa21.49■■□□□ 1.03
RUNDC3A-201ENST00000225441 DVL1P1P54792 670 aaPredicted RBP21.49■■□□□ 1.03
RUNDC3A-201ENST00000225441 TMEM33P57088 247 aa21.49■■□□□ 1.03
RUNDC3A-201ENST00000225441 AKR1C1Q04828 323 aa21.49■■□□□ 1.03
RUNDC3A-201ENST00000225441 YRDCQ86U90 279 aaKnown RBP21.49■■□□□ 1.03
RUNDC3A-201ENST00000225441 SKA3Q8IX90 412 aa21.49■■□□□ 1.03
RUNDC3A-201ENST00000225441 C1QTNF5Q9BXJ0 243 aa21.49■■□□□ 1.03
RUNDC3A-201ENST00000225441 GLAP06280 429 aa21.48■■□□□ 1.03
RUNDC3A-201ENST00000225441 MUC1P15941 1255 aaPredicted RBP21.48■■□□□ 1.03
RUNDC3A-201ENST00000225441 FUT3P21217 361 aa21.48■■□□□ 1.03
RUNDC3A-201ENST00000225441 P2RY1P47900 373 aa21.48■■□□□ 1.03
RUNDC3A-201ENST00000225441 TNFSF10P50591 281 aa21.48■■□□□ 1.03
RUNDC3A-201ENST00000225441 RAB5CP51148 216 aa21.48■■□□□ 1.03
RUNDC3A-201ENST00000225441 SRSF3P84103 164 aaKnown RBP21.48■■□□□ 1.03
RUNDC3A-201ENST00000225441 RSRP1Q9BUV0 290 aa21.48■■□□□ 1.03
RUNDC3A-201ENST00000225441 B4GALT7Q9UBV7 327 aa21.48■■□□□ 1.03
RUNDC3A-201ENST00000225441 TMED3Q9Y3Q3 217 aa21.48■■□□□ 1.03
RUNDC3A-201ENST00000225441 KLRC4-KLRK1H3BQV0 150 aa21.48■■□□□ 1.03
RUNDC3A-201ENST00000225441 CXCL13O43927 109 aa21.48■■□□□ 1.03
RUNDC3A-201ENST00000225441 B4GALT1P15291 398 aa21.48■■□□□ 1.03
RUNDC3A-201ENST00000225441 MEOX1P50221 254 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms