RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ZNF273Q14593 569 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 TUSC1Q2TAM9 212 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 ACSM3Q53FZ2 586 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 SPIN3Q5JUX0 258 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 FAM27D1Q5T7N8 215 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 LIPKQ5VXJ0 399 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 FIP1L1Q6UN15 594 aaKnown RBP10.41□□□□□ -0.74
LSM5-201ENST00000223084 CMTM4Q8IZR5 234 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 KIR3DL3Q8N743 410 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 TPRX1Q8N7U7 411 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 PXT1Q8NFP0 134 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 OR4S1Q8NGB4 309 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 TMEM158Q8WZ71 300 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 DUX5Q96PT3 197 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 FAM234AQ9H0X4 552 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 EXOSC4Q9NPD3 245 aaKnown RBP10.41□□□□□ -0.74
LSM5-201ENST00000223084 CKLFQ9UBR5 152 aa10.41□□□□□ -0.74
LSM5-201ENST00000223084 A0A0A6YYJ9 748 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 IGHV1-69DA0A0B4J2H0 117 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 RNASEK-C17orf49H0YIS7 233 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 M0R1W7 72 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 HTR3BO95264 441 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 IGHV1-69P01742 117 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 OR3A1P47881 315 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 GP2P55259 537 aaKnown RBP10.4□□□□□ -0.74
LSM5-201ENST00000223084 RSU1Q15404 277 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 GRK1Q15835 563 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 DEFB112Q30KQ8 113 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 Q6P435 159 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 UNQ9370/PRO34162Q6UXP9 181 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 C9orf139Q6ZV77 190 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 USP43Q70EL4 1123 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 GDPD3Q7L5L3 318 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 PHC2Q8IXK0 858 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 OR8H2Q8N162 312 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 PNKDQ8N490 385 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 ZDHHC22Q8N966 263 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 UFD1Q92890 307 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 TNFRSF14Q92956 283 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 TMEM203Q969S6 136 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 CPNE2Q96FN4 548 aaPredicted RBP10.4□□□□□ -0.74
LSM5-201ENST00000223084 DMRTB1Q96MA1 342 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 Q9H521 79 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 SEBOXQ9HB31 216 aaPredicted RBP10.4□□□□□ -0.74
LSM5-201ENST00000223084 GLS2Q9UI32 602 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 BLOC1S6Q9UL45 172 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 FOXJ3Q9UPW0 622 aa10.4□□□□□ -0.74
LSM5-201ENST00000223084 ZNF44P15621 663 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 MTNR1BP49286 362 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 RPS25P62851 125 aaKnown RBP10.39□□□□□ -0.75
LSM5-201ENST00000223084 TPBGQ13641 420 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 BLMHQ13867 455 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 PIGYQ3MUY2 71 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 ELP2Q6IA86 826 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 METAP1DQ6UB28 335 aaPredicted RBP10.39□□□□□ -0.75
LSM5-201ENST00000223084 ASCL4Q6XD76 172 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 C1orf122Q6ZSJ8 110 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 CEACAM19Q7Z692 300 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 JAGN1Q8N5M9 183 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 MS4A15Q8N5U1 240 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 OR5D13Q8NGL4 314 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 MUL1Q969V5 352 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 C1orf147Q96MC9 270 aaPredicted RBP10.39□□□□□ -0.75
LSM5-201ENST00000223084 C19orf24Q9BVV8 132 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 METTL9Q9H1A3 318 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 PPIL3Q9H2H8 161 aaKnown RBP10.39□□□□□ -0.75
LSM5-201ENST00000223084 PPA2Q9H2U2 334 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 RHOFQ9HBH0 211 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 ING3Q9NXR8 418 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 ZNF581Q9P0T4 197 aa10.39□□□□□ -0.75
LSM5-201ENST00000223084 STAB1Q9NY15 2570 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 A0A0G2JK05 382 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 A0A1W2PP11 408 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 SLC33A1O00400 549 aaPredicted RBP10.38□□□□□ -0.75
LSM5-201ENST00000223084 DEGS1O15121 323 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 CPEP16870 476 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 SERPINA2P20848 420 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 PRTN3P24158 256 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 MAPK3P27361 379 aaPredicted RBP10.38□□□□□ -0.75
LSM5-201ENST00000223084 DLX6P56179 175 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 MLLT11Q13015 90 aaPredicted RBP10.38□□□□□ -0.75
LSM5-201ENST00000223084 BAMBIQ13145 260 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 GPR50Q13585 617 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 TBCEQ15813 527 aaPredicted RBP10.38□□□□□ -0.75
LSM5-201ENST00000223084 HCP5Q6MZN7 132 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 RBMS3Q6XE24 437 aaKnown RBP10.38□□□□□ -0.75
LSM5-201ENST00000223084 TCF23Q7RTU1 214 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 C11orf42Q8N5U0 333 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.38□□□□□ -0.75
LSM5-201ENST00000223084 MGLLQ99685 303 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 METTL8Q9H825 291 aaKnown RBP10.38□□□□□ -0.75
LSM5-201ENST00000223084 ISYNA1Q9NPH2 558 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 ACOT13Q9NPJ3 140 aa10.38□□□□□ -0.75
LSM5-201ENST00000223084 A0A0U1RQK1 487 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 DNAJC9-AS1A6NH13 148 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 HSPB6O14558 160 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 MGST3O14880 152 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 SC5DO75845 299 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 LMO1P25800 156 aa10.37□□□□□ -0.75
LSM5-201ENST00000223084 BMXP51813 675 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms