RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ANKRD55Q3KP44 614 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 C3P1Q6ZMU1 363 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 CCDC120Q96HB5 630 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 SSUH2Q9Y2M2 353 aa25.36■■□□□ 1.65
PABPN1-201ENST00000216727 IQCF6A8MYZ5 107 aa25.35■■□□□ 1.65
PABPN1-201ENST00000216727 NAPSAO96009 420 aa25.35■■□□□ 1.65
PABPN1-201ENST00000216727 KNG1P01042 644 aa25.35■■□□□ 1.65
PABPN1-201ENST00000216727 IL13RA2Q14627 380 aa25.35■■□□□ 1.65
PABPN1-201ENST00000216727 CXorf67Q86X51 503 aaPredicted RBP25.35■■□□□ 1.65
PABPN1-201ENST00000216727 OR1J1Q8NGS3 322 aa25.35■■□□□ 1.65
PABPN1-201ENST00000216727 IL36RNQ9UBH0 155 aa25.35■■□□□ 1.65
PABPN1-201ENST00000216727 C5orf51A6NDU8 294 aa25.34■■□□□ 1.65
PABPN1-201ENST00000216727 RP2O75695 350 aa25.34■■□□□ 1.65
PABPN1-201ENST00000216727 PRKACAP17612 351 aa25.34■■□□□ 1.65
PABPN1-201ENST00000216727 ERVS71-1P61550 626 aa25.34■■□□□ 1.65
PABPN1-201ENST00000216727 EIF2S3LQ2VIR3 472 aaKnown RBP25.34■■□□□ 1.65
PABPN1-201ENST00000216727 GTF3AQ92664 365 aaKnown RBP25.34■■□□□ 1.65
PABPN1-201ENST00000216727 WDR13Q9H1Z4 485 aa25.34■■□□□ 1.65
PABPN1-201ENST00000216727 GTF3C1Q12789 2109 aa25.34■■□□□ 1.65
PABPN1-201ENST00000216727 EEF1E1-BLOC1S5C9J1V9 151 aa25.34■■□□□ 1.65
PABPN1-201ENST00000216727 K7EM74 188 aa25.34■■□□□ 1.65
PABPN1-201ENST00000216727 TUBG1P23258 451 aa25.34■■□□□ 1.65
PABPN1-201ENST00000216727 UNQ6126/PRO20091Q6UXV3 157 aa25.34■■□□□ 1.65
PABPN1-201ENST00000216727 OPN3Q9H1Y3 402 aaPredicted RBP25.34■■□□□ 1.65
PABPN1-201ENST00000216727 TUBG2Q9NRH3 451 aa25.34■■□□□ 1.65
PABPN1-201ENST00000216727 TNFSF18Q9UNG2 199 aa25.34■■□□□ 1.65
PABPN1-201ENST00000216727 LRP5LA4QPB2 252 aa25.33■■□□□ 1.65
PABPN1-201ENST00000216727 ZNF345Q14585 488 aa25.33■■□□□ 1.65
PABPN1-201ENST00000216727 PLEKHN1Q494U1 663 aaPredicted RBP25.33■■□□□ 1.65
PABPN1-201ENST00000216727 BEND4Q6ZU67 534 aa25.33■■□□□ 1.65
PABPN1-201ENST00000216727 FAM58AQ8N1B3 248 aa25.33■■□□□ 1.65
PABPN1-201ENST00000216727 CHMP1AQ9HD42 196 aaPredicted RBP25.33■■□□□ 1.65
PABPN1-201ENST00000216727 PTPRZ1P23471 2315 aaPredicted RBP25.33■■□□□ 1.64
PABPN1-201ENST00000216727 A0A0D9SG52 128 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 AGFG2O95081 481 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 IFNA2P01563 188 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 IGLV1-44P01699 117 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 PSG7Q13046 419 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 IFT22Q9H7X7 185 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 INTS1Q8N201 2190 aaKnown RBP25.32■■□□□ 1.64
PABPN1-201ENST00000216727 SPENQ96T58 3664 aaKnown RBP25.32■■□□□ 1.64
PABPN1-201ENST00000216727 C13orf42A0A1B0GVH6 325 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 ANKRD34BA5PLL1 514 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 CRYM-AS1A6NIL9 109 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 GLAP06280 429 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 ZNF728P0DKX0 622 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 FCGR2CP31995 323 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 LRRC37A5PQ49AS3 106 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 CLLU1Q5K131 121 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 SGPP2Q8IWX5 399 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 ZNF488Q96MN9 340 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 C1QTNF6Q9BXI9 259 aa25.32■■□□□ 1.64
PABPN1-201ENST00000216727 MKRN2OSH3BPM6 223 aa25.31■■□□□ 1.64
PABPN1-201ENST00000216727 GLP1RP43220 463 aa25.31■■□□□ 1.64
PABPN1-201ENST00000216727 UCP3P55916 312 aa25.31■■□□□ 1.64
PABPN1-201ENST00000216727 FAM169BQ8N8A8 192 aa25.31■■□□□ 1.64
PABPN1-201ENST00000216727 KLF14Q8TD94 323 aaPredicted RBP25.31■■□□□ 1.64
PABPN1-201ENST00000216727 PIK3IP1Q96FE7 263 aa25.31■■□□□ 1.64
PABPN1-201ENST00000216727 RIMS4Q9H426 269 aaPredicted RBP25.31■■□□□ 1.64
PABPN1-201ENST00000216727 Q9N2K0 584 aa25.31■■□□□ 1.64
PABPN1-201ENST00000216727 FAM215AQ9Y5M1 114 aa25.31■■□□□ 1.64
PABPN1-201ENST00000216727 RPS10-NUDT3A0A1W2PQS6 291 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 LINC00862A6NCI5 91 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 OR2F2O95006 317 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 PSMB6P28072 239 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 OR2F1Q13607 317 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 WDR86Q86TI4 376 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 THAP6Q8TBB0 222 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 MOB3AQ96BX8 217 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 RDH8Q9NYR8 311 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 RHBDL1O75783 438 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 KRTCAP3Q53RY4 240 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 BHLHA15Q7RTS1 189 aaPredicted RBP25.3■■□□□ 1.64
PABPN1-201ENST00000216727 Q8IYB0 196 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 ADAT1Q9BUB4 502 aaKnown RBP25.3■■□□□ 1.64
PABPN1-201ENST00000216727 GSX2Q9BZM3 304 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 TMEM165Q9HC07 324 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 C1orf123Q9NWV4 160 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 PRR13Q9NZ81 148 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 POLDIP2Q9Y2S7 368 aa25.3■■□□□ 1.64
PABPN1-201ENST00000216727 TUBAL3A6NHL2 446 aa25.29■■□□□ 1.64
PABPN1-201ENST00000216727 OR5H1A6NKK0 313 aa25.29■■□□□ 1.64
PABPN1-201ENST00000216727 ADAP1O75689 374 aa25.29■■□□□ 1.64
PABPN1-201ENST00000216727 CECR9P0C854 216 aa25.29■■□□□ 1.64
PABPN1-201ENST00000216727 C1orf185Q5T7R7 199 aa25.29■■□□□ 1.64
PABPN1-201ENST00000216727 KCNRGQ8N5I3 272 aa25.29■■□□□ 1.64
PABPN1-201ENST00000216727 DUSP1P28562 367 aa25.29■■□□□ 1.64
PABPN1-201ENST00000216727 RBMXP38159 391 aaKnown RBP25.29■■□□□ 1.64
PABPN1-201ENST00000216727 ALKBH6Q3KRA9 238 aa25.29■■□□□ 1.64
PABPN1-201ENST00000216727 C6orf183Q5T699 404 aa25.29■■□□□ 1.64
PABPN1-201ENST00000216727 SUMF2Q8NBJ7 301 aa25.29■■□□□ 1.64
PABPN1-201ENST00000216727 TOMM40LQ969M1 308 aa25.29■■□□□ 1.64
PABPN1-201ENST00000216727 AMDHD2Q9Y303 409 aa25.29■■□□□ 1.64
PABPN1-201ENST00000216727 SVILO95425 2214 aa25.28■■□□□ 1.64
PABPN1-201ENST00000216727 ESPL1Q14674 2120 aa25.28■■□□□ 1.64
PABPN1-201ENST00000216727 B3GALNT1O75752 331 aa25.28■■□□□ 1.64
PABPN1-201ENST00000216727 TIMP3P35625 211 aa25.28■■□□□ 1.64
PABPN1-201ENST00000216727 PIGPP57054 158 aa25.28■■□□□ 1.64
PABPN1-201ENST00000216727 SLC51BQ86UW2 128 aa25.28■■□□□ 1.64
PABPN1-201ENST00000216727 SCCPDHQ8NBX0 429 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms