RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 OR2T7P0C7T2 308 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 CCL3L1P16619 93 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 ZNF182P17025 639 aaPredicted RBP12.19□□□□□ -0.46
UPK3A-201ENST00000216211 GABRA5P31644 462 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 VBP1P61758 197 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 BDH1Q02338 343 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 C2orf68Q2NKX9 166 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 TMEM42Q69YG0 159 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 TMEM200BQ69YZ2 307 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 HIST2H2BDQ6DRA6 164 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 ZNF573Q86YE8 665 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 C11orf42Q8N5U0 333 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 OR14K1Q8NGZ2 314 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 OR2T27Q8NH04 317 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 FAM234AQ9H0X4 552 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 OR51E2Q9H255 320 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 A0A1W2PPH5 198 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 ZNF670-ZNF695F2Z2N8 137 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 NOS1APO75052 506 aaPredicted RBP12.18□□□□□ -0.46
UPK3A-201ENST00000216211 CSF1P09603 554 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 COX7A1P24310 79 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 NCS1P62166 190 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 LSM3P62310 102 aaKnown RBP12.18□□□□□ -0.46
UPK3A-201ENST00000216211 ZNF85Q03923 595 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 GPR50Q13585 617 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 ZNF273Q14593 569 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 ANGPTL5Q86XS5 388 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 CALHM1Q8IU99 346 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 ELMOD2Q8IZ81 293 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 OR10H4Q8NGA5 316 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 TRMT10AQ8TBZ6 339 aaKnown RBP12.18□□□□□ -0.46
UPK3A-201ENST00000216211 DYNC2LI1Q8TCX1 351 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 UFD1Q92890 307 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 NRIP2Q9BQI9 281 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 ALG8Q9BVK2 526 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 HEXA-AS1Q9H8Q6 139 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 HES4Q9HCC6 221 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 MRM2Q9UI43 246 aaKnown RBP12.18□□□□□ -0.46
UPK3A-201ENST00000216211 STUB1Q9UNE7 303 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 SLC22A13Q9Y226 551 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 POLDIP2Q9Y2S7 368 aa12.18□□□□□ -0.46
UPK3A-201ENST00000216211 H3BSH0 61 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 GPX5O75715 221 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 RPP14O95059 124 aaKnown RBP12.17□□□□□ -0.46
UPK3A-201ENST00000216211 TK1P04183 234 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 MPZP25189 248 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 PSMA1P25786 263 aaKnown RBP12.17□□□□□ -0.46
UPK3A-201ENST00000216211 EFNB2P52799 333 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 HERPUD1Q15011 391 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 ODF4Q2M2E3 257 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 LIPKQ5VXJ0 399 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 CRIP3Q6Q6R5 217 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 ZNF782Q6ZMW2 699 aaPredicted RBP12.17□□□□□ -0.46
UPK3A-201ENST00000216211 Q6ZTK2 550 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 SSX6Q7RTT6 188 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 EGFL6Q8IUX8 553 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 C11orf44Q8N8P7 122 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 OR4C13Q8NGP0 309 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 NDNFQ8TB73 568 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 MNTQ99583 582 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 TBX5Q99593 518 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 CHCHD6Q9BRQ6 235 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 BABAM2Q9NXR7 383 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 FOXJ3Q9UPW0 622 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 PLXNB1O43157 2135 aa12.17□□□□□ -0.46
UPK3A-201ENST00000216211 FAM230AA0A1W2PPH8 454 aa12.16□□□□□ -0.46
UPK3A-201ENST00000216211 A0A1W2PQL4 384 aaPredicted RBP12.16□□□□□ -0.46
UPK3A-201ENST00000216211 MEX3AA1L020 520 aaKnown RBP12.16□□□□□ -0.46
UPK3A-201ENST00000216211 VGLL3A8MV65 326 aa12.16□□□□□ -0.46
UPK3A-201ENST00000216211 LALBAP00709 142 aa12.16□□□□□ -0.46
UPK3A-201ENST00000216211 KIR2DS4P43632 304 aa12.16□□□□□ -0.46
UPK3A-201ENST00000216211 LGALS4P56470 323 aa12.16□□□□□ -0.46
UPK3A-201ENST00000216211 AANATQ16613 207 aa12.16□□□□□ -0.46
UPK3A-201ENST00000216211 LINC00299Q6ZSB3 139 aa12.16□□□□□ -0.46
UPK3A-201ENST00000216211 Q6ZSR3 168 aa12.16□□□□□ -0.46
UPK3A-201ENST00000216211 LHFPL4Q7Z7J7 247 aa12.16□□□□□ -0.46
UPK3A-201ENST00000216211 SYS1Q8N2H4 156 aa12.16□□□□□ -0.46
UPK3A-201ENST00000216211 YIPF7Q8N8F6 280 aa12.16□□□□□ -0.46
UPK3A-201ENST00000216211 PIFOQ8TCI5 191 aa12.16□□□□□ -0.46
UPK3A-201ENST00000216211 MRPL48Q96GC5 212 aaKnown RBP12.16□□□□□ -0.46
UPK3A-201ENST00000216211 CENPOQ9BU64 300 aa12.16□□□□□ -0.46
UPK3A-201ENST00000216211 DCSTAMPQ9H295 470 aa12.16□□□□□ -0.46
UPK3A-201ENST00000216211 ISG20L2Q9H9L3 353 aaKnown RBP12.16□□□□□ -0.46
UPK3A-201ENST00000216211 DNAH3Q8TD57 4116 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 LOC100506127A0A0U1RQW1 187 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 hCG_1809904A0A1W2PP81 198 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 A0A1W2PPE2 198 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 A0A1W2PR64 198 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 A0A1W2PRV1 198 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 MEGF11A6BM72 1044 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 CHST1O43916 411 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 GALP22466 123 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 TAS2R43P59537 309 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 ERVK11-1P61568 191 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 COL10A1Q03692 680 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 IL24Q13007 206 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 PLA1AQ53H76 456 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 CD200R1LQ6Q8B3 271 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 DYNAPQ8N1N2 210 aa12.15□□□□□ -0.46
UPK3A-201ENST00000216211 KLHDC1Q8N7A1 406 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms