RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ZNF488Q96MN9 340 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 SLC25A21Q9BQT8 299 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAAP24Q9BTP7 215 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 IL36RNQ9UBH0 155 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 OPN4Q9UHM6 478 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 CACNA1DQ01668 2161 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 TMEM82A0PJX8 343 aa16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 OR7C1O76099 320 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 THBDP07204 575 aa16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 NAT1P18440 290 aa16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 HRH1P35367 487 aa16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 GRK1Q15835 563 aa16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 C4orf46Q504U0 113 aa16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 DCAF12L2Q5VW00 463 aa16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 EMG1Q92979 244 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 SULT4A1Q9BR01 284 aa16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 MSL2Q9HCI7 577 aa16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 CFDP00746 253 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 OR4E1P0C645 316 aa16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 ZNF250P15622 560 aa16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 SNU13P55769 128 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 RNASE10Q5GAN6 216 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 ATPAF1Q5TC12 328 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 POM121Q96HA1 1249 aa16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 ZNF230Q9UIE0 474 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-201ENST00000162749 IGHV3-64DA0A0J9YX35 117 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 GOSR2O14653 212 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 CBX5P45973 191 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 IKZF1Q13422 519 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 SMUG1Q53HV7 270 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 BRICD5Q6PL45 260 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 TMEM108Q6UXF1 575 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 LRP11Q86VZ4 500 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 WFDC8Q8IUA0 241 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 TMEM171Q8WVE6 324 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 CITED4Q96RK1 184 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 HDHD3Q9BSH5 251 aaPredicted RBP16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 TMPRSS13Q9BYE2 586 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 DUSP13Q9UII6 198 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 A0A1B0GWJ7 208 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM90A10PA6NDY2 464 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM90A18PA6NE21 464 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM90A16PA6NEW6 464 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM90A20PA6NIJ5 464 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM90A8PA6NJQ4 464 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM90A7PA6NKC0 464 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 TMEM210A6NLX4 147 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM90A22PA8MWA6 464 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM90A12PA8MX19 464 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM90A5PA8MXJ8 464 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM90A23PA8MXZ1 464 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 PDCD6O75340 191 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 CSN2P05814 226 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM90A15PP0C7V4 464 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM90A13PP0C7W8 464 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM90A14PP0C7W9 464 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM90A24PP0C7X0 464 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 EXOSC2Q13868 293 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 MEF2DQ14814 521 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 NKPD1Q17RQ9 610 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 MRGPRFQ96AM1 343 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 AK3Q9UIJ7 227 aa16.72■□□□□ 0.27
TNFRSF1A-201ENST00000162749 ZFYVE26Q68DK2 2539 aa16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 F5H5P2 479 aa16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 H3BUI4 141 aa16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 CDIPTO14735 213 aa16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 TBPP20226 339 aa16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 ASCL1P50553 236 aa16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 SCGB2B2Q4G0G5 96 aa16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 SSX8Q7RTT4 187 aa16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 TMED4Q7Z7H5 227 aa16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 OR8H3Q8N146 312 aa16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 OR4K15Q8NH41 348 aa16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 ELMOD3Q96FG2 381 aa16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 ST6GALNAC5Q9BVH7 336 aa16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 MYOZ1Q9NP98 299 aaPredicted RBP16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 PLEKHA6Q9Y2H5 1048 aa16.71■□□□□ 0.27
TNFRSF1A-201ENST00000162749 MCRIP1C9JLW8 97 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 C3orf80F5H4A9 247 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ATXN7O15265 892 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 IGHV3-13P01766 116 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 PRKACAP17612 351 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 FUT3P21217 361 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 NFYAP23511 347 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 PTAFRP25105 342 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 OPCMLQ14982 345 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 MICBQ29980 383 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 VHLLQ6RSH7 139 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 C17orf107Q6ZR85 190 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 HOGA1Q86XE5 327 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 OR13G1Q8NGZ3 307 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 MAFIPQ8WZ33 124 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 DYRK2Q92630 601 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 CLEC4MQ9H2X3 399 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ZNF701Q9NV72 531 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 SLC2A8Q9NY64 477 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 ABCA4P78363 2273 aa16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 NOS1APO75052 506 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-201ENST00000162749 GRPP07492 148 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms