RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 OOEPA6NGQ2 149 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 CEACAM18A8MTB9 384 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 A8MXK9 166 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 F5H0A9 414 aaPredicted RBP6.12□□□□□ -1.43
PHGDH-225ENST00000641720 LGALS8O00214 317 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 ANGPTL7O43827 346 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 FCN3O75636 299 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 GPX5O75715 221 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 ALX3O95076 343 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 SERPINA3P01011 423 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 IGKV1D-12P01611 117 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 PGA5P0DJD9 388 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 IGHV4-38-2P0DP08 117 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 IRF2P14316 349 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 JUNBP17275 347 aaPredicted RBP6.12□□□□□ -1.43
PHGDH-225ENST00000641720 OMGP23515 440 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 GADD45AP24522 165 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 PSMA1P25786 263 aaKnown RBP6.12□□□□□ -1.43
PHGDH-225ENST00000641720 MAPK3P27361 379 aaPredicted RBP6.12□□□□□ -1.43
PHGDH-225ENST00000641720 BDKRB2P30411 391 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 CFHR2P36980 270 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 MDH2P40926 338 aaKnown RBP6.12□□□□□ -1.43
PHGDH-225ENST00000641720 OR3A4PP47883 348 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 RBP2P50120 134 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 ATP1B3P54709 279 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 MTCP1P56278 107 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 SEC61A1P61619 476 aaKnown RBP6.12□□□□□ -1.43
PHGDH-225ENST00000641720 IL24Q13007 206 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 KISS1Q15726 138 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 ZNF404Q494X3 552 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 DDI2Q5TDH0 399 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 SFRP4Q6FHJ7 346 aaPredicted RBP6.12□□□□□ -1.43
PHGDH-225ENST00000641720 CD200R1LQ6Q8B3 271 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 LYPD2Q6UXB3 125 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 LHFPL2Q6ZUX7 228 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 SLC25A26Q70HW3 274 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 LYPD6Q86Y78 171 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 ZNF573Q86YE8 665 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 C1orf87Q8N0U7 546 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 POC1AQ8NBT0 407 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 OR10Z1Q8NGY1 313 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 RAB1CQ92928 201 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 SLAMF9Q96A28 289 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 TIMD4Q96H15 378 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 GFI1Q99684 422 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 NRIP2Q9BQI9 281 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 TMEM246Q9BRR3 403 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 PKIBQ9C010 78 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 RBFOX1Q9NWB1 397 aaKnown RBP6.12□□□□□ -1.43
PHGDH-225ENST00000641720 MTCH1Q9NZJ7 389 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 IL36RNQ9UBH0 155 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 CKLFQ9UBR5 152 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 NUP50Q9UKX7 468 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 TENM2Q9NT68 2774 aa6.12□□□□□ -1.43
PHGDH-225ENST00000641720 TRDV1A0A1B0GX56 115 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 NDUFA7O95182 113 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 GYPAP02724 150 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 MAS1P04201 325 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 OCMP0CE72 109 aaPredicted RBP6.11□□□□□ -1.43
PHGDH-225ENST00000641720 CALCBP10092 127 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 SELLP14151 372 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 CD36P16671 472 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 AMY2BP19961 511 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 BCL3P20749 454 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 FPR2P25090 351 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 NPBWR2P48146 333 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 CEBPDP49716 269 aaPredicted RBP6.11□□□□□ -1.43
PHGDH-225ENST00000641720 PROK1P58294 105 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 ERVK11-1P61568 191 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 LCN2P80188 198 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 PDZK1IP1Q13113 114 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 TRAM1Q15629 374 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 TMEM155Q4W5P6 130 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 HSD17B12Q53GQ0 312 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 SAMD5Q5TGI4 173 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 TEX36Q5VZQ5 186 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 STUMQ69YW2 141 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 C22orf42Q6IC83 251 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 ACP7Q6ZNF0 438 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 SATL1Q86VE3 508 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 LRRC28Q86X40 367 aaPredicted RBP6.11□□□□□ -1.43
PHGDH-225ENST00000641720 FGFRL1Q8N441 504 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 KIR3DL3Q8N743 410 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 OR5T2Q8NGG2 359 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 TNFAIP8L1Q8WVP5 186 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 PHYHIPQ92561 330 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 THRSPQ92748 146 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 RAB39BQ96DA2 213 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 YIPF6Q96EC8 236 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 CEP19Q96LK0 163 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 GAL3ST1Q99999 423 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 MRPS26Q9BYN8 205 aaKnown RBP6.11□□□□□ -1.43
PHGDH-225ENST00000641720 FAM192AQ9GZU8 254 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 OR51E2Q9H255 320 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 RNF167Q9H6Y7 350 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 TMEM165Q9HC07 324 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 NEK6Q9HC98 313 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 HES4Q9HCC6 221 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 VCX3AQ9NNX9 186 aa6.11□□□□□ -1.43
PHGDH-225ENST00000641720 TMEM138Q9NPI0 162 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms