RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 C1orf123Q9NWV4 160 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 PFDN2Q9UHV9 154 aa18.49■□□□□ 0.55
CLN6-224ENST00000638076 CRYM-AS1A6NIL9 109 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 F8VVB4 439 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 F8VWA3 439 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 FAM74A1Q5RGS3 127 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 MDP1Q86V88 176 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 ARPC5LQ9BPX5 153 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 OPA3Q9H6K4 179 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 ZNF175Q9Y473 711 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 F5H0A9 414 aaPredicted RBP18.48■□□□□ 0.55
CLN6-224ENST00000638076 TMEM211Q6ICI0 200 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 P4HA3Q7Z4N8 544 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 DPPA2Q7Z7J5 298 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 SAXO1Q8IYX7 474 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 HS3ST6Q96QI5 342 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 SLC25A32Q9H2D1 315 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 GP6Q9HCN6 339 aa18.48■□□□□ 0.55
CLN6-224ENST00000638076 TEX46H3BTG2 121 aa18.47■□□□□ 0.55
CLN6-224ENST00000638076 ZNF728P0DKX0 622 aa18.47■□□□□ 0.55
CLN6-224ENST00000638076 FCGR2CP31995 323 aa18.47■□□□□ 0.55
CLN6-224ENST00000638076 PIGPP57054 158 aa18.47■□□□□ 0.55
CLN6-224ENST00000638076 FXYD4P59646 89 aa18.47■□□□□ 0.55
CLN6-224ENST00000638076 ELP2Q6IA86 826 aa18.47■□□□□ 0.55
CLN6-224ENST00000638076 FAM219AQ8IW50 185 aa18.47■□□□□ 0.55
CLN6-224ENST00000638076 POC1AQ8NBT0 407 aa18.47■□□□□ 0.55
CLN6-224ENST00000638076 NANOS1Q8WY41 292 aaKnown RBP18.47■□□□□ 0.55
CLN6-224ENST00000638076 RRNAD1Q96FB5 475 aaKnown RBP18.47■□□□□ 0.55
CLN6-224ENST00000638076 POM121Q96HA1 1249 aa18.47■□□□□ 0.55
CLN6-224ENST00000638076 DHRS9Q9BPW9 319 aa18.47■□□□□ 0.55
CLN6-224ENST00000638076 MTCH1Q9NZJ7 389 aa18.47■□□□□ 0.55
CLN6-224ENST00000638076 GSKIPQ9P0R6 139 aa18.47■□□□□ 0.55
CLN6-224ENST00000638076 DOCK7Q96N67 2140 aa18.47■□□□□ 0.55
CLN6-224ENST00000638076 OTOGLQ3ZCN5 2332 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 WT1P19544 449 aaPredicted RBP18.46■□□□□ 0.55
CLN6-224ENST00000638076 PMELP40967 661 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 UNQ6126/PRO20091Q6UXV3 157 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 SLC30A7Q8NEW0 376 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 OR5A2Q8NGI9 324 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 LRRC20Q8TCA0 184 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 GMPPAQ96IJ6 420 aaPredicted RBP18.46■□□□□ 0.55
CLN6-224ENST00000638076 HIST1H2AAQ96QV6 131 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 RASL12Q9NYN1 266 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 OR5AC2Q9NZP5 309 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM186AA6NE01 2351 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 ASPMQ8IZT6 3477 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM90A10PA6NDY2 464 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM90A18PA6NE21 464 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM90A16PA6NEW6 464 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM90A20PA6NIJ5 464 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM90A8PA6NJQ4 464 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM90A7PA6NKC0 464 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM90A22PA8MWA6 464 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM90A12PA8MX19 464 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM90A5PA8MXJ8 464 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM90A23PA8MXZ1 464 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 LILRA1O75019 489 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM90A15PP0C7V4 464 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM90A13PP0C7W8 464 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM90A14PP0C7W9 464 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FAM90A24PP0C7X0 464 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 FGF12P61328 243 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 RAB32Q13637 225 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 PRSS54Q6PEW0 395 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 KCNMB2Q9Y691 235 aa18.46■□□□□ 0.55
CLN6-224ENST00000638076 TNRC6AQ8NDV7 1962 aaKnown RBP18.46■□□□□ 0.54
CLN6-224ENST00000638076 CRYZL1O95825 349 aa18.45■□□□□ 0.54
CLN6-224ENST00000638076 RBM39Q14498 530 aaKnown RBP18.45■□□□□ 0.54
CLN6-224ENST00000638076 TMEM200AQ86VY9 491 aa18.45■□□□□ 0.54
CLN6-224ENST00000638076 EXTL1Q92935 676 aa18.45■□□□□ 0.54
CLN6-224ENST00000638076 IL36RNQ9UBH0 155 aa18.45■□□□□ 0.54
CLN6-224ENST00000638076 ANKRD30BLA7E2S9 258 aa18.45■□□□□ 0.54
CLN6-224ENST00000638076 TRAPPC2LH3BP13 241 aa18.45■□□□□ 0.54
CLN6-224ENST00000638076 IL15RAQ13261 267 aa18.45■□□□□ 0.54
CLN6-224ENST00000638076 ABCA11PQ4W5N1 156 aa18.45■□□□□ 0.54
CLN6-224ENST00000638076 MKXQ8IYA7 352 aa18.45■□□□□ 0.54
CLN6-224ENST00000638076 PHYHIPLQ96FC7 376 aa18.45■□□□□ 0.54
CLN6-224ENST00000638076 LYL1P12980 280 aa18.44■□□□□ 0.54
CLN6-224ENST00000638076 OR5L1Q8NGL2 311 aa18.44■□□□□ 0.54
CLN6-224ENST00000638076 OR5P3Q8WZ94 311 aa18.44■□□□□ 0.54
CLN6-224ENST00000638076 SYNGR1O43759 233 aa18.44■□□□□ 0.54
CLN6-224ENST00000638076 IGHG3P01860 377 aa18.44■□□□□ 0.54
CLN6-224ENST00000638076 SPINK2P20155 84 aa18.44■□□□□ 0.54
CLN6-224ENST00000638076 SPATA46Q5T0L3 261 aa18.44■□□□□ 0.54
CLN6-224ENST00000638076 HAGHLQ6PII5 290 aaPredicted RBP18.44■□□□□ 0.54
CLN6-224ENST00000638076 GCNT2Q8N0V5 402 aa18.44■□□□□ 0.54
CLN6-224ENST00000638076 PIK3IP1Q96FE7 263 aa18.44■□□□□ 0.54
CLN6-224ENST00000638076 NARFLQ9H6Q4 476 aa18.44■□□□□ 0.54
CLN6-224ENST00000638076 MEMO1Q9Y316 297 aa18.44■□□□□ 0.54
CLN6-224ENST00000638076 SESN1Q9Y6P5 492 aa18.44■□□□□ 0.54
CLN6-224ENST00000638076 MSGN1A6NI15 193 aa18.43■□□□□ 0.54
CLN6-224ENST00000638076 IL32P24001 234 aa18.43■□□□□ 0.54
CLN6-224ENST00000638076 S100A10P60903 97 aa18.43■□□□□ 0.54
CLN6-224ENST00000638076 OR2T2Q6IF00 324 aa18.43■□□□□ 0.54
CLN6-224ENST00000638076 RTN4IP1Q8WWV3 396 aaPredicted RBP18.43■□□□□ 0.54
CLN6-224ENST00000638076 CLCF1Q9UBD9 225 aa18.43■□□□□ 0.54
CLN6-224ENST00000638076 KCNIP3Q9Y2W7 256 aa18.43■□□□□ 0.54
CLN6-224ENST00000638076 MPC1Q9Y5U8 109 aa18.43■□□□□ 0.54
CLN6-224ENST00000638076 EP300Q09472 2414 aaPredicted RBP18.43■□□□□ 0.54
CLN6-224ENST00000638076 WISP2O76076 250 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms