RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 TPPPO94811 219 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 GYPAP02724 150 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 EIF4EP06730 217 aaKnown RBP6.48□□□□□ -1.37
PNKP-229ENST00000637897 ANXA2P07355 339 aaKnown RBP6.48□□□□□ -1.37
PNKP-229ENST00000637897 UBCP0CG48 685 aaKnown RBP6.48□□□□□ -1.37
PNKP-229ENST00000637897 PPIAL4GP0DN37 164 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 HKR1P10072 659 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 SLC2A2P11168 524 aaPredicted RBP6.48□□□□□ -1.37
PNKP-229ENST00000637897 SELLP14151 372 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 FSTP19883 344 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 PRTN3P24158 256 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 AZGP1P25311 298 aaKnown RBP6.48□□□□□ -1.37
PNKP-229ENST00000637897 SOX2P48431 317 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 CX3CR1P49238 355 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 INPP1P49441 399 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 KRTAP10-3P60369 221 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 FGF12P61328 243 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 RELBQ01201 579 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 PRB3Q04118 309 aaPredicted RBP6.48□□□□□ -1.37
PNKP-229ENST00000637897 OR8G1Q15617 311 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 BAK1Q16611 211 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 DEFB112Q30KQ8 113 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 ESCO2Q56NI9 601 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 DMRTC1Q5HYR2 192 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 UBE2NLQ5JXB2 153 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 BCL2L15Q5TBC7 163 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 TMEM244Q5VVB8 128 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 TEX36Q5VZQ5 186 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 PYHIN1Q6K0P9 492 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 MZT2BQ6NZ67 158 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 WDR82Q6UXN9 313 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 C12orf54Q6X4T0 127 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 BRD3OSQ6XYD6 125 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 KRT74Q7RTS7 529 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 MRPL21Q7Z2W9 205 aaKnown RBP6.48□□□□□ -1.37
PNKP-229ENST00000637897 ZNF554Q86TJ5 538 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 MUC20Q8N307 709 aaPredicted RBP6.48□□□□□ -1.37
PNKP-229ENST00000637897 HPSE2Q8WWQ2 592 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 ERGIC1Q969X5 290 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 TMEM106AQ96A25 262 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 NUDT16L1Q9BRJ7 211 aaKnown RBP6.48□□□□□ -1.37
PNKP-229ENST00000637897 ADAT1Q9BUB4 502 aaKnown RBP6.48□□□□□ -1.37
PNKP-229ENST00000637897 SUCNR1Q9BXA5 334 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 SIRPDQ9H106 197 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 TLNRD1Q9H1K6 362 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 MOB1AQ9H8S9 216 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 BRD7Q9NPI1 651 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 MRPL15Q9P015 296 aaKnown RBP6.48□□□□□ -1.37
PNKP-229ENST00000637897 RNF7Q9UBF6 113 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 CKLFQ9UBR5 152 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 MIOXQ9UGB7 285 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 OR52A1Q9UKL2 312 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 TBC1D24Q9ULP9 559 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 HHLA2Q9UM44 414 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 GTF2A1LQ9UNN4 478 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 FOXJ3Q9UPW0 622 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 DHDHQ9UQ10 334 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 AK6Q9Y3D8 172 aaKnown RBP6.48□□□□□ -1.37
PNKP-229ENST00000637897 RHBDD3Q9Y3P4 386 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 N6AMT1Q9Y5N5 214 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 ETV7Q9Y603 341 aa6.48□□□□□ -1.37
PNKP-229ENST00000637897 PRKDCP78527 4128 aaKnown RBP6.48□□□□□ -1.37
PNKP-229ENST00000637897 CENPVL3A0A0U1RRI6 287 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 GGT3PA6NGU5 568 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 TRIM77I1YAP6 450 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 IFNL4K9M1U5 179 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 GMDSO60547 372 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 PAHP00439 452 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 IGLV3-1P01715 115 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 GRPP07492 148 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 RNASE1P07998 156 aaKnown RBP6.47□□□□□ -1.37
PNKP-229ENST00000637897 SNRPBP14678 240 aaKnown RBP6.47□□□□□ -1.37
PNKP-229ENST00000637897 HSD11B1P28845 292 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 CFHR2P36980 270 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 RANBP1P43487 201 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 GSK3AP49840 483 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 CAPZA1P52907 286 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 GNB2P62879 340 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 GRB2P62993 217 aaKnown RBP6.47□□□□□ -1.37
PNKP-229ENST00000637897 SRSF4Q08170 494 aaKnown RBP6.47□□□□□ -1.37
PNKP-229ENST00000637897 MFGE8Q08431 387 aaPredicted RBP6.47□□□□□ -1.37
PNKP-229ENST00000637897 MALLQ13021 153 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 P2RY14Q15391 338 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 TAF13Q15543 124 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 OR8B8Q15620 311 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 FAM76BQ5HYJ3 339 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 CCBE1Q6UXH8 406 aaPredicted RBP6.47□□□□□ -1.37
PNKP-229ENST00000637897 FAM57BQ71RH2 274 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 GDPD3Q7L5L3 318 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 LRRTM1Q86UE6 522 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 BPIFB2Q8N4F0 458 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 PLPP7Q8NBV4 271 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 OR1M1Q8NGA1 313 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 OR4M1Q8NGD0 313 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 OR8B3Q8NGG8 313 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 C15orf40Q8WUR7 153 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 GCDHQ92947 438 aaPredicted RBP6.47□□□□□ -1.37
PNKP-229ENST00000637897 SPTSSAQ969W0 71 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 ITPKCQ96DU7 683 aa6.47□□□□□ -1.37
PNKP-229ENST00000637897 REEP6Q96HR9 211 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms