RNA–Protein interactions for RNA: ENST00000637551.2

CLN3-259, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-259ENST00000637551 OR5T2Q8NGG2 359 aa15.1■□□□□ 0.01
CLN3-259ENST00000637551 WDFY2Q96P53 400 aa15.1■□□□□ 0.01
CLN3-259ENST00000637551 JMJD8Q96S16 334 aa15.1■□□□□ 0.01
CLN3-259ENST00000637551 SIRPDQ9H106 197 aa15.1■□□□□ 0.01
CLN3-259ENST00000637551 TAS2R4Q9NYW5 299 aa15.1■□□□□ 0.01
CLN3-259ENST00000637551 RBP4P02753 201 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 TK1P04183 234 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 CPEP16870 476 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 LMO1P25800 156 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 FGF12P61328 243 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 PAX5Q02548 391 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 IKZF1Q13422 519 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 UNQ9370/PRO34162Q6UXP9 181 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 LINC00596Q86U02 117 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 OR8H2Q8N162 312 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 ZNRF1Q8ND25 227 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 TMEM185AQ8NFB2 350 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 OR51T1Q8NGJ9 327 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 ZNF418Q8TF45 676 aaPredicted RBP15.09■□□□□ 0.01
CLN3-259ENST00000637551 FCGR1BQ92637 280 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 SNX22Q96L94 193 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 ZNF488Q96MN9 340 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 OR14A2Q96R54 314 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 OR5M11Q96RB7 305 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 UQCC2Q9BRT2 126 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 SUCNR1Q9BXA5 334 aa15.09■□□□□ 0.01
CLN3-259ENST00000637551 ANK2Q01484 3957 aa15.08■□□□□ 0
CLN3-259ENST00000637551 SH2D1BO14796 132 aa15.08■□□□□ 0
CLN3-259ENST00000637551 TOX4O94842 621 aa15.08■□□□□ 0
CLN3-259ENST00000637551 INMTO95050 263 aa15.08■□□□□ 0
CLN3-259ENST00000637551 CSN2P05814 226 aa15.08■□□□□ 0
CLN3-259ENST00000637551 GALP22466 123 aa15.08■□□□□ 0
CLN3-259ENST00000637551 EEF1B2P24534 225 aaKnown RBP15.08■□□□□ 0
CLN3-259ENST00000637551 ERP29P30040 261 aaKnown RBP15.08■□□□□ 0
CLN3-259ENST00000637551 ZNF93P35789 620 aaPredicted RBP15.08■□□□□ 0
CLN3-259ENST00000637551 TGFBR2P37173 567 aa15.08■□□□□ 0
CLN3-259ENST00000637551 PTGFRP43088 359 aa15.08■□□□□ 0
CLN3-259ENST00000637551 GMFBP60983 142 aa15.08■□□□□ 0
CLN3-259ENST00000637551 MEF2CQ06413 473 aaPredicted RBP15.08■□□□□ 0
CLN3-259ENST00000637551 GPR176Q14439 515 aa15.08■□□□□ 0
CLN3-259ENST00000637551 IL13RA2Q14627 380 aa15.08■□□□□ 0
CLN3-259ENST00000637551 DDI2Q5TDH0 399 aa15.08■□□□□ 0
CLN3-259ENST00000637551 IL17RELQ6ZVW7 336 aa15.08■□□□□ 0
CLN3-259ENST00000637551 ZFP41Q8N8Y5 198 aa15.08■□□□□ 0
CLN3-259ENST00000637551 OR51A2Q8NGJ7 313 aa15.08■□□□□ 0
CLN3-259ENST00000637551 TMEM158Q8WZ71 300 aa15.08■□□□□ 0
CLN3-259ENST00000637551 MRPS24Q96EL2 167 aaKnown RBP15.08■□□□□ 0
CLN3-259ENST00000637551 GPER1Q99527 375 aa15.08■□□□□ 0
CLN3-259ENST00000637551 ZMAT3Q9HA38 289 aaKnown RBP15.08■□□□□ 0
CLN3-259ENST00000637551 RBFOX1Q9NWB1 397 aaKnown RBP15.08■□□□□ 0
CLN3-259ENST00000637551 IGKV1-12A0A0C4DH73 117 aa15.07■□□□□ 0
CLN3-259ENST00000637551 A0A1B0GW55 424 aa15.07■□□□□ 0
CLN3-259ENST00000637551 hCG_1809904A0A1W2PP81 198 aa15.07■□□□□ 0
CLN3-259ENST00000637551 A0A1W2PPE2 198 aa15.07■□□□□ 0
CLN3-259ENST00000637551 A0A1W2PR64 198 aa15.07■□□□□ 0
CLN3-259ENST00000637551 A0A1W2PRV1 198 aa15.07■□□□□ 0
CLN3-259ENST00000637551 FUOMA2VDF0 154 aa15.07■□□□□ 0
CLN3-259ENST00000637551 GABRPO00591 440 aa15.07■□□□□ 0
CLN3-259ENST00000637551 SPRY1O43609 319 aaPredicted RBP15.07■□□□□ 0
CLN3-259ENST00000637551 TCF21O43680 179 aa15.07■□□□□ 0
CLN3-259ENST00000637551 HAND1O96004 215 aa15.07■□□□□ 0
CLN3-259ENST00000637551 IGKV1D-12P01611 117 aa15.07■□□□□ 0
CLN3-259ENST00000637551 DUX4L2P0CJ85 424 aa15.07■□□□□ 0
CLN3-259ENST00000637551 DUX4L3P0CJ86 424 aa15.07■□□□□ 0
CLN3-259ENST00000637551 DUX4L4P0CJ87 422 aa15.07■□□□□ 0
CLN3-259ENST00000637551 DUX4L5P0CJ88 424 aa15.07■□□□□ 0
CLN3-259ENST00000637551 DUX4L6P0CJ89 424 aa15.07■□□□□ 0
CLN3-259ENST00000637551 DUX4L7P0CJ90 424 aa15.07■□□□□ 0
CLN3-259ENST00000637551 TMEM225BP0DP42 221 aa15.07■□□□□ 0
CLN3-259ENST00000637551 NDUFB7P17568 137 aa15.07■□□□□ 0
CLN3-259ENST00000637551 BCL3P20749 454 aa15.07■□□□□ 0
CLN3-259ENST00000637551 KCNJ3P48549 501 aa15.07■□□□□ 0
CLN3-259ENST00000637551 GUCA2AQ02747 115 aa15.07■□□□□ 0
CLN3-259ENST00000637551 BLMHQ13867 455 aa15.07■□□□□ 0
CLN3-259ENST00000637551 KLF17Q5JT82 389 aaPredicted RBP15.07■□□□□ 0
CLN3-259ENST00000637551 GPR157Q5UAW9 335 aa15.07■□□□□ 0
CLN3-259ENST00000637551 NCR3LG1Q68D85 454 aa15.07■□□□□ 0
CLN3-259ENST00000637551 DUX4L9Q6RFH8 374 aaPredicted RBP15.07■□□□□ 0
CLN3-259ENST00000637551 OR52N4Q8NGI2 321 aa15.07■□□□□ 0
CLN3-259ENST00000637551 FOXRED1Q96CU9 486 aaPredicted RBP15.07■□□□□ 0
CLN3-259ENST00000637551 MGLLQ99685 303 aa15.07■□□□□ 0
CLN3-259ENST00000637551 IFT22Q9H7X7 185 aa15.07■□□□□ 0
CLN3-259ENST00000637551 METTL8Q9H825 291 aaKnown RBP15.07■□□□□ 0
CLN3-259ENST00000637551 GHRLQ9UBU3 117 aa15.07■□□□□ 0
CLN3-259ENST00000637551 DUX4Q9UBX2 424 aa15.07■□□□□ 0
CLN3-259ENST00000637551 LRRC42Q9Y546 428 aa15.07■□□□□ 0
CLN3-259ENST00000637551 F8VVB4 439 aa15.06■□□□□ 0
CLN3-259ENST00000637551 F8VWA3 439 aa15.06■□□□□ 0
CLN3-259ENST00000637551 H3BUI4 141 aa15.06■□□□□ 0
CLN3-259ENST00000637551 SFTPBP07988 381 aa15.06■□□□□ 0
CLN3-259ENST00000637551 PRKACAP17612 351 aa15.06■□□□□ 0
CLN3-259ENST00000637551 GABRA5P31644 462 aa15.06■□□□□ 0
CLN3-259ENST00000637551 NPBWR2P48146 333 aa15.06■□□□□ 0
CLN3-259ENST00000637551 RPL31P62899 125 aaKnown RBP15.06■□□□□ 0
CLN3-259ENST00000637551 COL10A1Q03692 680 aa15.06■□□□□ 0
CLN3-259ENST00000637551 KCTD21Q4G0X4 260 aa15.06■□□□□ 0
CLN3-259ENST00000637551 OR13C5Q8NGS8 318 aa15.06■□□□□ 0
CLN3-259ENST00000637551 TNFAIP8L1Q8WVP5 186 aa15.06■□□□□ 0
CLN3-259ENST00000637551 SGCDQ92629 289 aa15.06■□□□□ 0
CLN3-259ENST00000637551 CCDC90BQ9GZT6 254 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms