RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 INPP5EQ9NRR6 644 aa15.43■□□□□ 0.06
CLN6-221ENST00000637494 LOC100130705A0A1B0GUX0 176 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 ARG1P05089 322 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 BCL3P20749 454 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 GABRA5P31644 462 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 PROK1P58294 105 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 RAB40BQ12829 278 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 LY6EQ16553 131 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 KLHL22Q53GT1 634 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 PQLC1Q8N2U9 271 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 C11orf42Q8N5U0 333 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 ZNF555Q8NEP9 628 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 OR4C13Q8NGP0 309 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 OR13C9Q8NGT0 318 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 HAVCR2Q8TDQ0 301 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 STMN2Q93045 179 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 ABCB10Q9NRK6 738 aa15.42■□□□□ 0.06
CLN6-221ENST00000637494 RBFOX1Q9NWB1 397 aaKnown RBP15.42■□□□□ 0.06
CLN6-221ENST00000637494 RPL36Q9Y3U8 105 aaKnown RBP15.42■□□□□ 0.06
CLN6-221ENST00000637494 TBL2Q9Y4P3 447 aaKnown RBP15.42■□□□□ 0.06
CLN6-221ENST00000637494 IGKV1-9A0A0C4DH69 117 aa15.41■□□□□ 0.06
CLN6-221ENST00000637494 FUOMA2VDF0 154 aa15.41■□□□□ 0.06
CLN6-221ENST00000637494 E9PQ18 207 aa15.41■□□□□ 0.06
CLN6-221ENST00000637494 SH2D1BO14796 132 aa15.41■□□□□ 0.06
CLN6-221ENST00000637494 CCDC159P0C7I6 412 aa15.41■□□□□ 0.06
CLN6-221ENST00000637494 GBX2P52951 348 aaPredicted RBP15.41■□□□□ 0.06
CLN6-221ENST00000637494 PDZK1IP1Q13113 114 aa15.41■□□□□ 0.06
CLN6-221ENST00000637494 DYNC1I2Q13409 638 aaKnown RBP15.41■□□□□ 0.06
CLN6-221ENST00000637494 ZNF146Q15072 292 aa15.41■□□□□ 0.06
CLN6-221ENST00000637494 SLC35E4Q6ICL7 350 aa15.41■□□□□ 0.06
CLN6-221ENST00000637494 OR5D14Q8NGL3 314 aa15.41■□□□□ 0.06
CLN6-221ENST00000637494 RHOXF1Q8NHV9 184 aa15.41■□□□□ 0.06
CLN6-221ENST00000637494 C17orf50Q8WW18 174 aa15.41■□□□□ 0.06
CLN6-221ENST00000637494 RNF166Q96A37 237 aaPredicted RBP15.41■□□□□ 0.06
CLN6-221ENST00000637494 CPNE2Q96FN4 548 aaPredicted RBP15.41■□□□□ 0.06
CLN6-221ENST00000637494 RHOFQ9HBH0 211 aa15.41■□□□□ 0.06
CLN6-221ENST00000637494 EXOSC4Q9NPD3 245 aaKnown RBP15.41■□□□□ 0.06
CLN6-221ENST00000637494 AASSQ9UDR5 926 aa15.41■□□□□ 0.06
CLN6-221ENST00000637494 LINC00312Q9Y6C7 94 aa15.41■□□□□ 0.06
CLN6-221ENST00000637494 TMEM212A6NML5 194 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 OR4C45A6NMZ5 311 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 MGST3O14880 152 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 BAG2O95816 211 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 MT-ND2P03891 347 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 IGHV1-8P0DP01 117 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 GABRB1P18505 474 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 NPBWR2P48146 333 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 SNU13P55769 128 aaKnown RBP15.4■□□□□ 0.06
CLN6-221ENST00000637494 DLX6P56179 175 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 C11orf88Q6PI97 169 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 TRAPPC6BQ86SZ2 158 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 SERPINA12Q8IW75 414 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 OR5AK2Q8NH90 309 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 TSEN15Q8WW01 171 aaKnown RBP15.4■□□□□ 0.06
CLN6-221ENST00000637494 RFT1Q96AA3 541 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 MALSU1Q96EH3 234 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 NPFFR1Q9GZQ6 430 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 CHST6Q9GZX3 395 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 ZCCHC4Q9H5U6 513 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 HMG20AQ9NP66 347 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 AMBNQ9NP70 447 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 FAM118AQ9NWS6 357 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 FBLN5Q9UBX5 448 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 GSTK1Q9Y2Q3 226 aa15.4■□□□□ 0.06
CLN6-221ENST00000637494 TMEM82A0PJX8 343 aa15.39■□□□□ 0.05
CLN6-221ENST00000637494 H3BUI4 141 aa15.39■□□□□ 0.05
CLN6-221ENST00000637494 IGHA1P01876 353 aa15.39■□□□□ 0.05
CLN6-221ENST00000637494 HCKP08631 526 aa15.39■□□□□ 0.05
CLN6-221ENST00000637494 DUSP1P28562 367 aa15.39■□□□□ 0.05
CLN6-221ENST00000637494 SAXO1Q8IYX7 474 aa15.39■□□□□ 0.05
CLN6-221ENST00000637494 OR51A4Q8NGJ6 313 aa15.39■□□□□ 0.05
CLN6-221ENST00000637494 OR2T6Q8NHC8 308 aa15.39■□□□□ 0.05
CLN6-221ENST00000637494 SLC29A1Q99808 456 aa15.39■□□□□ 0.05
CLN6-221ENST00000637494 MMP27Q9H306 513 aa15.39■□□□□ 0.05
CLN6-221ENST00000637494 RANBP3Q9H6Z4 567 aaPredicted RBP15.39■□□□□ 0.05
CLN6-221ENST00000637494 ERVK13-1Q9NX77 482 aa15.39■□□□□ 0.05
CLN6-221ENST00000637494 PITPNC1Q9UKF7 332 aa15.39■□□□□ 0.05
CLN6-221ENST00000637494 DHDHQ9UQ10 334 aa15.39■□□□□ 0.05
CLN6-221ENST00000637494 MYRFQ9Y2G1 1151 aa15.39■□□□□ 0.05
CLN6-221ENST00000637494 MEX3AA1L020 520 aaKnown RBP15.38■□□□□ 0.05
CLN6-221ENST00000637494 SIRPB1O00241 398 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 MAGEB3O15480 346 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 CALCBP10092 127 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 KRTAP10-3P60369 221 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 FAM189A2Q15884 450 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 ZNF626Q68DY1 528 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 Q6ZTK2 550 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 LHFPL4Q7Z7J7 247 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 OR11H6Q8NGC7 330 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 OR10AC1Q8NH08 325 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 AJUBAQ96IF1 538 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 RDH12Q96NR8 316 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 GAL3ST2Q9H3Q3 398 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 ISG20L2Q9H9L3 353 aaKnown RBP15.38■□□□□ 0.05
CLN6-221ENST00000637494 SMPD3Q9NY59 655 aaPredicted RBP15.38■□□□□ 0.05
CLN6-221ENST00000637494 IL36RNQ9UBH0 155 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 SESN1Q9Y6P5 492 aa15.38■□□□□ 0.05
CLN6-221ENST00000637494 TRGV10A0A0A0MS01 117 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 FAM90A8PA6NJQ4 464 aa15.37■□□□□ 0.05
CLN6-221ENST00000637494 SULT1B1O43704 296 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms