RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 KLK11Q9UBX7 282 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 ICE1Q9Y2F5 2266 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 ITPR2Q14571 2701 aa13.02□□□□□ -0.33
CLN6-219ENST00000637329 PRKACAP17612 351 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 SLC6A1P30531 599 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 CFHR2P36980 270 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 GATA4P43694 442 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 ZNF81P51508 661 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 TAS2R19P59542 299 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 EFNB3Q15768 340 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 TAF9Q16594 264 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 SPIN3Q5JUX0 258 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 SIGIRRQ6IA17 410 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 NRARPQ7Z6K4 114 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 TMEM229BQ8NBD8 167 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 OR10Z1Q8NGY1 313 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 TMEM204Q9BSN7 226 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 ZMAT3Q9HA38 289 aaKnown RBP13.01□□□□□ -0.33
CLN6-219ENST00000637329 HES4Q9HCC6 221 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 IFT46Q9NQC8 304 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 PLEKHJ1Q9NW61 149 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 COPZ2Q9P299 210 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 IL19Q9UHD0 177 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 KCNK7Q9Y2U2 307 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 NBASA2RRP1 2371 aa13.01□□□□□ -0.33
CLN6-219ENST00000637329 LINC00854A0A1B0GVQ3 168 aa13□□□□□ -0.33
CLN6-219ENST00000637329 DEFB108AA8MXU0 73 aa13□□□□□ -0.33
CLN6-219ENST00000637329 CDIPTO14735 213 aa13□□□□□ -0.33
CLN6-219ENST00000637329 RHBDL1O75783 438 aa13□□□□□ -0.33
CLN6-219ENST00000637329 GLAP06280 429 aa13□□□□□ -0.33
CLN6-219ENST00000637329 GRPP07492 148 aa13□□□□□ -0.33
CLN6-219ENST00000637329 CD55P08174 381 aa13□□□□□ -0.33
CLN6-219ENST00000637329 AKAIN1P0CW23 69 aa13□□□□□ -0.33
CLN6-219ENST00000637329 FUT3P21217 361 aa13□□□□□ -0.33
CLN6-219ENST00000637329 DUSP18Q8NEJ0 188 aa13□□□□□ -0.33
CLN6-219ENST00000637329 NUDCD2Q8WVJ2 157 aa13□□□□□ -0.33
CLN6-219ENST00000637329 ERGIC1Q969X5 290 aa13□□□□□ -0.33
CLN6-219ENST00000637329 MEGF10Q96KG7 1140 aa13□□□□□ -0.33
CLN6-219ENST00000637329 OCSTAMPQ9BR26 566 aa13□□□□□ -0.33
CLN6-219ENST00000637329 FN3KRPQ9HA64 309 aa13□□□□□ -0.33
CLN6-219ENST00000637329 FBN2P35556 2912 aa13□□□□□ -0.33
CLN6-219ENST00000637329 MYO7BQ6PIF6 2116 aa13□□□□□ -0.33
CLN6-219ENST00000637329 FAM240BA0A1B0GVZ2 78 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 A6NLC8 198 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 E7EQL1 145 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 M0R233 179 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 SSX5O60225 188 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 OR7C1O76099 320 aaPredicted RBP12.99□□□□□ -0.33
CLN6-219ENST00000637329 NXPH2O95156 264 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 GOSR1O95249 250 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 NAT1P18440 290 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 DTYMKP23919 212 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 LOXP28300 417 aaPredicted RBP12.99□□□□□ -0.33
CLN6-219ENST00000637329 APOBEC3AP31941 199 aaPredicted RBP12.99□□□□□ -0.33
CLN6-219ENST00000637329 BTCP35070 178 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 SERPINF1P36955 418 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 MRPS15P82914 257 aaKnown RBP12.99□□□□□ -0.33
CLN6-219ENST00000637329 ARFRP1Q13795 201 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 DAZAP2Q15038 168 aaPredicted RBP12.99□□□□□ -0.33
CLN6-219ENST00000637329 TESK1Q15569 626 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 ACTBL2Q562R1 376 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 FAM209AQ5JX71 171 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 NKAPLQ5M9Q1 402 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 PRAMEF6Q5VXH4 476 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 CCBE1Q6UXH8 406 aaPredicted RBP12.99□□□□□ -0.33
CLN6-219ENST00000637329 WDR82Q6UXN9 313 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 C6orf201Q7Z4U5 140 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 FAM90A1Q86YD7 464 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 FAM222BQ8WU58 562 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 GTF3AQ92664 365 aaKnown RBP12.99□□□□□ -0.33
CLN6-219ENST00000637329 OR2V2Q96R30 315 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 CHST6Q9GZX3 395 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 DPAGT1Q9H3H5 408 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 HRASLSQ9HDD0 168 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 RASL12Q9NYN1 266 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 FBXO9Q9UK97 447 aaPredicted RBP12.99□□□□□ -0.33
CLN6-219ENST00000637329 ANKHD1Q8IWZ3 2542 aaKnown RBP12.99□□□□□ -0.33
CLN6-219ENST00000637329 C2CD3Q4AC94 2353 aa12.99□□□□□ -0.33
CLN6-219ENST00000637329 HCFC1P51610 2035 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 ZNF736B4DX44 427 aaPredicted RBP12.98□□□□□ -0.33
CLN6-219ENST00000637329 B9A039 149 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 F8VVB4 439 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 F8VWA3 439 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 SIAH2O43255 324 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 SSX4O60224 188 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 IGHV1-46P01743 117 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 CD74P04233 296 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 IGFBP2P18065 325 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 KIR2DL3P43628 341 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 TNFAIP6P98066 277 aaPredicted RBP12.98□□□□□ -0.33
CLN6-219ENST00000637329 IKZF1Q13422 519 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 MEF2DQ14814 521 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 ZNF146Q15072 292 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 ZMYND11Q15326 602 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 SMIM21Q3B7S5 101 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 ZNF672Q499Z4 452 aaPredicted RBP12.98□□□□□ -0.33
CLN6-219ENST00000637329 PLET1Q6UQ28 207 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 C11orf53Q8IXP5 236 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 ZNF488Q96MN9 340 aa12.98□□□□□ -0.33
CLN6-219ENST00000637329 DHRS9Q9BPW9 319 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms