RNA–Protein interactions for RNA: ENST00000636233.1

SMARCA2-249, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-249ENST00000636233 NOS1P29475 1434 aa0.55□□□□□ -2.32
SMARCA2-249ENST00000636233 COL11A1P12107 1806 aaPredicted RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 NYNRINQ9P2P1 1898 aaKnown RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 IGHV3-21A0A0B4J1V1 117 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 LOC100653049A0A140TA62 436 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 GSTTP1A0A1W2PQM5 241 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 SLC5A10A0PJK1 596 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 MYBPHLA2RUH7 354 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 OR2AT4A6NND4 320 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 H0YC42 278 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 K7EPK0 472 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 PRMT5O14744 637 aaPredicted RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 COX7A2P2O60397 106 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 ENTPD6O75354 484 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 KRT34O76011 436 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 CPSF4O95639 269 aaKnown RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 OTCP00480 354 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 HLA-AP01891 365 aaKnown RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 RLN2P04090 185 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 STAG3L2P0CL84 134 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 SCGB1C2P0DMR2 95 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 TAC1P20366 129 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 CD9P21926 228 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 PRTN3P24158 256 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 HTR2CP28335 458 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 IMPA1P29218 277 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 IL12BP29460 328 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 DEKP35659 375 aaKnown RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 LGALS7P47929 136 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 DNASE1L1P49184 302 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 FOXA1P55317 472 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 CCL23P55773 120 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 IL5RAQ01344 420 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 IFFO1Q0D2I5 559 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 TPBGQ13641 420 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 ZNF404Q494X3 552 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 NKAIN1Q4KMZ8 207 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 PDZD11Q5EBL8 140 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 UBE2NLQ5JXB2 153 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 LIN9Q5TKA1 542 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 RESP18Q5W5W9 173 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 EPGNQ6UW88 154 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 LYZL2Q7Z4W2 148 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 SETD3Q86TU7 594 aaPredicted RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 LINC00596Q86U02 117 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 KRTAP13-1Q8IUC0 172 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 PDCL2Q8N4E4 241 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 EIF4E3Q8N5X7 224 aaKnown RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 ZFP62Q8NB50 900 aaPredicted RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 OR4K2Q8NGD2 314 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 OR13C9Q8NGT0 318 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 OR6K2Q8NGY2 324 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 OR8S1Q8NH09 359 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 SCGB1C1Q8TD33 95 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 CASTOR1Q8WTX7 329 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 MITD1Q8WV92 249 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 ZCCHC13Q8WW36 166 aaKnown RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 C22orf15Q8WYQ4 148 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 APOBEC3DQ96AK3 386 aaPredicted RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 PYURFQ96I23 114 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 IGF2BP2-AS1Q96M15 143 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 ZNF75AQ96N20 296 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 QKIQ96PU8 341 aaKnown RBP eCLIP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 SPACA5Q96QH8 159 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 STACQ99469 402 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 VAT1Q99536 393 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 HIGD2AQ9BW72 106 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 SLC38A1Q9H2H9 487 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 SND1-IT1Q9HBX3 110 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 C12orf4Q9NQ89 552 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 DIABLOQ9NR28 239 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 TMEM38BQ9NVV0 291 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 NLE1Q9NVX2 485 aaPredicted RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 DNAJC27Q9NZQ0 273 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 ZMAT5Q9UDW3 170 aaKnown RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 ANXA10Q9UJ72 324 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 C14orf166Q9Y224 244 aaKnown RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 SLC22A14Q9Y267 594 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 KLF13Q9Y2Y9 288 aaPredicted RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 V9GYY9 64 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 TRPM3Q9HCF6 1732 aaPredicted RBP0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 NRCAMQ92823 1304 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 KIF27Q86VH2 1401 aa0.54□□□□□ -2.32
SMARCA2-249ENST00000636233 COL5A3P25940 1745 aaPredicted RBP0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 SLX4Q8IY92 1834 aa0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 NAV1Q8NEY1 1877 aa0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 TRAV8-7A0A075B6U6 113 aa0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 IGKV1OR2-108A0A075B7D4 117 aa0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 IGHV3-43A0A0B4J1X8 118 aa0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 ZNF729A6NN14 1252 aaPredicted RBP0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 GGTLC3B5MD39 225 aa0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 F5H5P2 479 aa0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 KDELR3O43731 214 aa0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 PSIP1O75475 530 aaKnown RBP0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 DEDDO75618 318 aa0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 CDS2O95674 445 aa0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 IGHMP01871 453 aa0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 CRYGCP07315 174 aa0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 CTSGP08311 255 aa0.53□□□□□ -2.32
SMARCA2-249ENST00000636233 CECR9P0C854 216 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms