RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 BTN2A1Q7KYR7 527 aa12.84□□□□□ -0.35
CLN6-211ENST00000635754 NKAIN3Q8N8D7 197 aa12.84□□□□□ -0.35
CLN6-211ENST00000635754 PXT1Q8NFP0 134 aa12.84□□□□□ -0.35
CLN6-211ENST00000635754 H1FXQ92522 213 aaKnown RBP12.84□□□□□ -0.35
CLN6-211ENST00000635754 DACT3Q96B18 629 aaPredicted RBP12.84□□□□□ -0.35
CLN6-211ENST00000635754 S100A13Q99584 98 aa12.84□□□□□ -0.35
CLN6-211ENST00000635754 ELL3Q9HB65 397 aaPredicted RBP12.84□□□□□ -0.35
CLN6-211ENST00000635754 NDUFB11Q9NX14 153 aa12.84□□□□□ -0.35
CLN6-211ENST00000635754 GLS2Q9UI32 602 aa12.84□□□□□ -0.35
CLN6-211ENST00000635754 MAB21L2Q9Y586 359 aa12.84□□□□□ -0.35
CLN6-211ENST00000635754 KIR2DS1A0A191URI9 304 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 SFTPBP07988 381 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 CALCBP10092 127 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 NDUFB7P17568 137 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 SRP14P37108 136 aaKnown RBP12.83□□□□□ -0.36
CLN6-211ENST00000635754 PTGFRP43088 359 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 OR3A4PP47883 348 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 BMXP51813 675 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 HSD17B12Q53GQ0 312 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 FAM27D1Q5T7N8 215 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 CDH26Q8IXH8 852 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 FGFRL1Q8N441 504 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 JAGN1Q8N5M9 183 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 PHYHIPQ92561 330 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 NKX3-1Q99801 234 aaPredicted RBP12.83□□□□□ -0.36
CLN6-211ENST00000635754 HMG20AQ9NP66 347 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 IL36RNQ9UBH0 155 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 SF3B6Q9Y3B4 125 aaKnown RBP12.83□□□□□ -0.36
CLN6-211ENST00000635754 AUP1Q9Y679 476 aa12.83□□□□□ -0.36
CLN6-211ENST00000635754 MEGF11A6BM72 1044 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 CCRL2O00421 344 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 ARL6IP5O75915 188 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 HAND1O96004 215 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 LIPFP07098 398 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 CHRM2P08172 466 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 UCHL1P09936 223 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 SRD5A1P18405 259 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 MTNR1BP49286 362 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 SNU13P55769 128 aaKnown RBP12.82□□□□□ -0.36
CLN6-211ENST00000635754 COL10A1Q03692 680 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 ZNF146Q15072 292 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 RSU1Q15404 277 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 SSX1Q16384 188 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 TMEM91Q6ZNR0 172 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 ASCC1Q8N9N2 400 aaKnown RBP12.82□□□□□ -0.36
CLN6-211ENST00000635754 SLITRK2Q9H156 845 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 RPUSD1Q9UJJ7 312 aaKnown RBP12.82□□□□□ -0.36
CLN6-211ENST00000635754 GSTK1Q9Y2Q3 226 aa12.82□□□□□ -0.36
CLN6-211ENST00000635754 SH2D1BO14796 132 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 FAM157CP0CG43 387 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 SRMP19623 302 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 RIPPLY3P57055 190 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 FGF12P61328 243 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 FABP5Q01469 135 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 PAX8Q06710 450 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 ELP2Q6IA86 826 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 ASCL4Q6XD76 172 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 C1QL2Q7Z5L3 287 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 DCTN5Q9BTE1 182 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 FAM234AQ9H0X4 552 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 METTL9Q9H1A3 318 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 SEBOXQ9HB31 216 aaPredicted RBP12.81□□□□□ -0.36
CLN6-211ENST00000635754 ING4Q9UNL4 249 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 C2CD3Q4AC94 2353 aa12.81□□□□□ -0.36
CLN6-211ENST00000635754 CDRT1O95170 752 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 HTR3BO95264 441 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 AVPP01185 164 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 CSTBP04080 98 aaKnown RBP12.8□□□□□ -0.36
CLN6-211ENST00000635754 TK1P04183 234 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 DUSP1P28562 367 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 GP2P55259 537 aaKnown RBP12.8□□□□□ -0.36
CLN6-211ENST00000635754 NEDD8Q15843 81 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 C1orf229Q6ZS94 237 aaPredicted RBP12.8□□□□□ -0.36
CLN6-211ENST00000635754 TSPAN14Q8NG11 270 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 OR10K1Q8NGX5 313 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 NANPQ8TBE9 248 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 MUL1Q969V5 352 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 UQCC2Q9BRT2 126 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 PPIL3Q9H2H8 161 aaKnown RBP12.8□□□□□ -0.36
CLN6-211ENST00000635754 CNTD2Q9H8S5 307 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 VCX3AQ9NNX9 186 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 EXOSC4Q9NPD3 245 aaKnown RBP12.8□□□□□ -0.36
CLN6-211ENST00000635754 PCDHB16Q9NRJ7 776 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 IL36GQ9NZH8 169 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 OPN4Q9UHM6 478 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 MRPS28Q9Y2Q9 187 aaKnown RBP12.8□□□□□ -0.36
CLN6-211ENST00000635754 NAV3Q8IVL0 2385 aa12.8□□□□□ -0.36
CLN6-211ENST00000635754 A0A087WXM4 84 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 TRBV23-1A0A0A0MS06 115 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 A0A1W2PQ09 198 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 K7N7A8 449 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 ZNF780AO75290 641 aaPredicted RBP12.79□□□□□ -0.36
CLN6-211ENST00000635754 PPIAL4GP0DN37 164 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 HOXB4P17483 251 aaPredicted RBP12.79□□□□□ -0.36
CLN6-211ENST00000635754 ADRA2CP18825 462 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 METTL11BQ5VVY1 283 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 GLT8D1Q68CQ7 371 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 AWAT2Q6E213 333 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 LRRTM1Q86UE6 522 aa12.79□□□□□ -0.36
CLN6-211ENST00000635754 LY6G5BQ8NDX9 201 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms